Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr12g00318	ATGAACAACAATACAGCAGGAGCGTCATCGAAAGGTAAAGTTGGTTCGTCTCAGCCATCAGAGACATCATTCAAACGCAAGAGAGGGGTTTTTCAGAAAGATCTGCAGCATATGATGTATGGTTTTGGAGATGATCCTAATCCGTTGCCAGAGACTGTTGCTCTTTTGGAGGACATTGTTGTTGAGTATGTGACAGATATGGTGCATAAAGCCCAAGATATTGCATCAAAGAGGGGAAAGCTCTTGACTGAGGATTTCTTGTTCTTGATCCGCAAGGACTTGCCCAAGTTAAACCGTTGTACAGAACTACTGTCTATGAACGAAGAACTGAAACAAGCTAGGAAAGCATTCGATGTGGATGAGGAGAAGCTGGCGTCAACAGAATGA	387	43.41	MNNNTAGASSKGKVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDIVVEYVTDMVHKAQDIASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLASTE	128

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr12g00318	128	FunFam	Transcription initiation factor TFIID subunit 13	30	74	-	-
	Amtr12g00318	128	CDD	TAF13	28	118	IPR003195	GO:0006366(InterPro)
	Amtr12g00318	128	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID-SUPT3-RELATED	7	127	IPR003195	GO:0006366(PANTHER)\|GO:0006366(InterPro)
	Amtr12g00318	128	Coils	Coil	103	123	-	-
	Amtr12g00318	128	Gene3D	Histone, subunit A	30	74	IPR009072	GO:0046982(InterPro)
	Amtr12g00318	128	MobiDBLite	consensus disorder prediction	1	28	-	-
	Amtr12g00318	128	MobiDBLite	consensus disorder prediction	1	25	-	-
	Amtr12g00318	128	Pfam	Transcription initiation factor IID, 18kD subunit	30	118	IPR003195	GO:0006366(InterPro)
	Amtr12g00318	128	SUPERFAMILY	Histone-fold	31	73	IPR009072	GO:0046982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr12g00318	K03127	transcription initiation factor TFIID subunit 13