Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr12g00397 | ATGGACTCAACCACACAAGAACTTAAACATAGAACCACCCAAGACCAATCTCCAACCCTTCAAGACAACAATGACAACGTCAATAACATAAGCAACACAAAACCTAAAACCCAACGGCGGACCGCGATCCCTACCCGTGGCATTCGGTCACTAGCTGTAGGGATCGCGATCCCGTTGGCTCTAACCTTAGCCAACATATCCATATTCGGCTGGAACCGGAGTTACCAAGCCATCAGCAAGCCGTTCTGGGTCCCACCGTTATGGGCTCTCCATCTAACATGTTTGGGTTCGGCTTTTGTTATGGGCTTATCGGCTTGGCTTGTTTGGGCCGAGGGTGGGTTTCATAAGAAGCCGGCTGCGATTGGGTTTTATTTGGGTCAGCTTGGGCTGAGCCTGGCTTGGGAGCCGGTGTTTTTTAAGATGGGTGCGGCTAGGTTGGGTTTGTTGGTGTGTTTGGGTCAGATGGCGACTATGTGGTCGTGTTCGAGGATGTTTGGAAGTGTTAACCGGACCGCGGGTGACTTGGTGAAGCTTTGTTTGGTTTGGTCCGGGTTTTTGACGCTTGTGAATTTGTATTTTGTGGTTTGA | 588 | 50.17 | MDSTTQELKHRTTQDQSPTLQDNNDNVNNISNTKPKTQRRTAIPTRGIRSLAVGIAIPLALTLANISIFGWNRSYQAISKPFWVPPLWALHLTCLGSAFVMGLSAWLVWAEGGFHKKPAAIGFYLGQLGLSLAWEPVFFKMGAARLGLLVCLGQMATMWSCSRMFGSVNRTAGDLVKLCLVWSGFLTLVNLYFVV | 195 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr12g00397 | 195 | FunFam | translocator protein 2 | 47 | 195 | - | - | |
| Amtr12g00397 | 195 | CDD | TSPO-MBR | 51 | 194 | IPR004307 | GO:0016020(InterPro) | |
| Amtr12g00397 | 195 | Pfam | TspO-MBR family | 57 | 193 | IPR004307 | GO:0016020(InterPro) | |
| Amtr12g00397 | 195 | MobiDBLite | consensus disorder prediction | 10 | 41 | - | - | |
| Amtr12g00397 | 195 | Gene3D | TspO-MBR protein | 47 | 195 | IPR038330 | - | |
| Amtr12g00397 | 195 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Amtr12g00397 | 195 | PANTHER | PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR | 38 | 193 | IPR004307 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr12g00397 | K05770 | translocator protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr12:13286270 | Amtr06g01726 | Amtr-Chr6:34669067 | wgd |