AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00558 ATGCAGGCACAAGTTTTCCGGCCATCCTTTCTTCCTCACAGCTTCAATTCCATCACAACCACCCTCTCACCTTGTTCAAATCTTTCTTTTCCTAATAAATTCCCATATGTAGTCTGCAGGTGCAACAAGCTAGAACAAGAAGCATTAGCTGGCCTCCCTAAACACTTTCATGATGAAGAATGGCAAGCCCGACAGCGAGAAAAGACTAAAGAATTGGAGCGGTTACGCCAAGAAGAAGATGAAGAAGAGGAAAGAATAGTTGACGAGTATAGGGAAATCGGCATGGTGTTGAAGGGTTATCCTCAAGAAGATGTTTTCAAAGCAAAGAAATTGGTGTCCAGTTTTATAAAAGCTGCTGAAGAAATCGAAGAGAAAATTGAGGAAGCTGCAGAGAGAGGTGAATTGAATGAACTGGTTCTTATGGTCATCTGGACTCGTCTTGATCTTGCTCGCCGTGATGAAGAAAAAGATGCTATAAGAAGTCTGGATCTTTTGTACAGACGGGTCGAGACCGAAATCTTGAAAAGGCAAGCCAGTCCAGCCATGAGACTGCTTAATGAACTTTTAATACTGCATGATGGATTTGATGATGACGGGTGGCTCAAAGCATGTAAAAAACGCATGATTGAAACATTCCCACGCGAAGATCCATTTAGTCTCTTGGTTCCTGCAGGCTTTGATCTTGATAAGCACCATGGGCCTCTAGCAAGACCCGCAATGGAAGCCGACGATCTTCTTCTAAGAATCGACTTCATTCGAGAGGTCGATACATTGCTAAAGGAAGTTAGGCCTCCGGAAACCGTAGAATCGAGTACCGAAGCCCTTGATCCCCAGTCTGTTGCAAATAGATTAAAAGAACAAGAGAAGAAGAAAGTTATTGGTCAAGTTGAAGCTCTTTTGGATCTTGCCATAAAACTGAGTTGGTAG 927 43.04 MQAQVFRPSFLPHSFNSITTTLSPCSNLSFPNKFPYVVCRCNKLEQEALAGLPKHFHDEEWQARQREKTKELERLRQEEDEEEERIVDEYREIGMVLKGYPQEDVFKAKKLVSSFIKAAEEIEEKIEEAAERGELNELVLMVIWTRLDLARRDEEKDAIRSLDLLYRRVETEILKRQASPAMRLLNELLILHDGFDDDGWLKACKKRMIETFPREDPFSLLVPAGFDLDKHHGPLARPAMEADDLLLRIDFIREVDTLLKEVRPPETVESSTEALDPQSVANRLKEQEKKKVIGQVEALLDLAIKLSW 308
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00558 308 Coils Coil 58 92 - -
Amtr12g00558 308 PANTHER PROTEIN PALE CRESS, CHLOROPLASTIC 42 308 IPR034563 GO:0009501(PANTHER)|GO:0009507(PANTHER)|GO:0009509(PANTHER)|GO:0009513(PANTHER)|GO:0009536(InterPro)|GO:0009537(PANTHER)|GO:0009658(PANTHER)|GO:0009658(InterPro)|GO:0009965(PANTHER)|GO:0010239(InterPro)|GO:0048366(InterPro)|GO:0071482(PANTHER)
Amtr12g00558 308 Coils Coil 112 136 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00558 - -