AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00612 ATGGCCGAAGAGCGCCATATGAGTGTTGTTGGATTTCATGAATCAGAAATGCCATGGCTTCCTCCTTACATCCTCAACGAAGGTGTGGACACATCTCCGGATTATGGAGAAGATGATGATTATCGTTTATTTTCAAAGGAGCGGGATTATAATTATAAGCATAGACAACAGCCACCATCTGGCCGGAAGTCGCGGGCGGCTGCACAACCTCCTTTGCTTCCGTCACCACCGAATTGGAAGAACCATTCAAAAGCAGACCAAAAGACCAAATATCACTCGAACTGGGCAACTGGAGGACCTGGTATGCAAGCTGTGTTTCTAGCTTCTGGCCAAAGATCTGGTGGCACAGGAGTTTTTCTTCCTCGAACAGCAGGACCTAATGTCGAAAAACCTAGAAAACCAGCATTTGCTCCCATTCTCCTTCCAGCGCGTGTAGTACAAGCTTTGAACCTCAACGTGCATGAAGTAGGCTTGCAAATTAAGCCACGAGAACATAACAATAATGTGAAGGGACTAGAATGCGATCGGATTAGAACTAAGAAGAACAAGGATATGTCAAGCCAAACATGTTTCATCTCTCAAAACCGAAGTTCCTCTCCTGAAATATTTCTCCCGAAAGAGTGGACTTACTAG 633 45.18 MAEERHMSVVGFHESEMPWLPPYILNEGVDTSPDYGEDDDYRLFSKERDYNYKHRQQPPSGRKSRAAAQPPLLPSPPNWKNHSKADQKTKYHSNWATGGPGMQAVFLASGQRSGGTGVFLPRTAGPNVEKPRKPAFAPILLPARVVQALNLNVHEVGLQIKPREHNNNVKGLECDRIRTKKNKDMSSQTCFISQNRSSSPEIFLPKEWTY 210
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00612 210 MobiDBLite consensus disorder prediction 46 92 - -
Amtr12g00612 210 PANTHER TIP41-LIKE PROTEIN 55 210 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00612 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr6:12156505 Amtr12g00612 Amtr-Chr12:18602963 dispersed
Amtr Amtr-Chr6:43457425 Amtr12g00612 Amtr-Chr12:18602963 dispersed
Amtr Amtr-Chr12:18602963 Amtr04g01391 Amtr-Chr4:22427748 transposed