AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g00625 ATGGCTTCTGTTGGGTTAAGTTTTCTCAAAGTTCTTGAGAACCCATCAATGGGTTCCAAGACTCATGAACAAAAAGATGAAGTTTATGTTCATCCAATGGTGAAAAGGTCTAAATCAGCATTGAGTACCAAGAGTTTAGAAATGTGTACCGAGAGTTTAGGAAGTGAAACGGGTAGTGATGTTAGTGAAAGTGGTGATGAGTTTTGTGCACTTTCTTTGGAGGAAAGAGAGAGATTGAGGGCAATTCATAGGTTAAAGTACCGAAACTTTGACCGAAAAGTTCGCCGGAGTGACTTTCCACCACCGTTGACCTCCATCAGTGGGTCCGATGGGGCGGTGAAGGTCAACCACCATAGGGAAGGTGGGAGGTTGGTTATAAAAGCTGTGAGCTATTCTAACTGTGGTACGAGTTTCCAAACGGAACGTACGAATGGGAGGCTTAGGCTTTCATTGTTGAAGGACCGTTCGGTAATTTATGGAAGTGAAAGGGTTGAAATGGAAAATTATGAAAGTAAAAGGGTTGAAATGGACAATGATGAAAGTGAAAGGGTTGAAATGGAAAATTATGAAGAAGGTGGTGAAGTGGAATATGAGGATGAGGAGGAGAGAGAGGAGGGTGGTTGTGTTCGCGGCTGGCGATGGGATATGGACGGAAACCGGTGGCCGATTGCCGGAAAAGGGGAGTTGAAAATGCTAACAAGGTGCAAAGAGGGTGGCAATGGGAACAAAGTGTTTACAAATTGGGGTTCATCGGTAGCAATTTCTTGA 768 44.01 MASVGLSFLKVLENPSMGSKTHEQKDEVYVHPMVKRSKSALSTKSLEMCTESLGSETGSDVSESGDEFCALSLEERERLRAIHRLKYRNFDRKVRRSDFPPPLTSISGSDGAVKVNHHREGGRLVIKAVSYSNCGTSFQTERTNGRLRLSLLKDRSVIYGSERVEMENYESKRVEMDNDESERVEMENYEEGGEVEYEDEEEREEGGCVRGWRWDMDGNRWPIAGKGELKMLTRCKEGGNGNKVFTNWGSSVAIS 255
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g00625 255 MobiDBLite consensus disorder prediction 181 203 - -
Amtr12g00625 255 MobiDBLite consensus disorder prediction 173 203 - -
Amtr12g00625 255 Pfam Fantastic Four meristem regulator 98 151 IPR046431 -
Amtr12g00625 255 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 6 248 IPR021410 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g00625 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr1:105843355 Amtr12g00625 Amtr-Chr12:18917449 dispersed
Amtr Amtr-Chr5:14067747 Amtr12g00625 Amtr-Chr12:18917449 dispersed
Amtr Amtr-Chr7:97254968 Amtr12g00625 Amtr-Chr12:18917449 dispersed
Amtr Amtr-Chr12:18917449 Amtr04g00848 Amtr-Chr4:12971710 transposed