AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr12g01637 | ATGGCTTCGTTGTCGAAGGCGGATTCCAGGCGCATGTATTCGTGGTGGTGGAACAGTCACATAAGTCCCAAGAATTCTAAATGGCTTCAGGAGAACCTTACAGACGTGGATATTAAAGTGAAAGCGATGATAAAGCTCATTGAAGAAGATGCTGATTCATTTGCTAGAAGGGCAGAAATGTACTACAAAAAGCGACCCGAGCTTATGAAACTGGTTGAAGAGTTATACAGAGCATATCGCGCCTTAGCCGAAAGATATGATCATGCAACTGGGGCCCTCCGCCAGGCTCACAAAACAATGACTGAAGTCTTCCCAAATCAAGTCCCCGCAGGATGTGATGACTCGACGACTAATTCTCCCTACGATACTGATCCTCAGACCCCAGATTCAAGAACCACAACAAATCCATGTTTTGACTCTGATGACTTCCGGAAAGACGGGTCAACAGGAACCGCAAGAAAAGCCCTCAATTTCGATGATTCAGAAGATGTCAACAGTGATAAAAACGGGACCCATGATCGAAACTTATCTCAGTTCGAGAGTGTAGGTGTGGATGATAAAGAGATCTTATTATTAAAAGAAGCCTTGGCCAAATTAGAAGATGAGAAAGAAGCTGGATTAAAGCAGTACATCGAGAGTTTGGATAGGTTATCGAAGCTCGAGTCCGAGATCTTGAAATCACAAGAAGAATCCAGAGAACTTGCTGACCGTGCGAGTAAAGCCGAGGCCGAATCCCAAAGTTTGAAAGACATGCTGCAAAAGTTAGAAGCCGAAAAAGAGGAAAGTCTTGACCTTTACCATCAGGCCGAAAAGAAAATCGAGGAAATAAATGAGCAAAATTTGAAGGAAGAAATTAGTAGATTAGAAGATGAAAGAGATGCTGCGTATGATCAGTACAAACAGTCTTTGAATCTGATATCAGATTTAGAGAAGAAGTTATTAGAAGCGGAGAAGGAAATTGAAGCGTTGAAGCTAGCGATTGCTAAATTAACCGAAGAGAAAGAAGCACAGACTGTTTTGTACCAAAAATGCATGGAGACTATTGCAAGTCTTGAACTTAGACTTGTTTGTGCAGAAGAAGAAACCGAAAAGCTGAAAGCCGAAATCGACAATGGAGTTTTACTTCTAAAGGGTGCGGAAGAACAGCGGTTAATTCTAGAAAAGTCGAACAAGAGTCTTCACTTGGAATTGGAGTCAATGGAGGTTAAAATCAGTAGTCAAAGTCAAGAAATAACTGAGAAGCAGAAGGAGTTAGGGAGGTTATGGACTTGTATACAAGAAGAGCGGTTACGGTTCGTGGAGGCGGAAACCGCTTTCCAAACTTTACAACAATTACACGCTCAATCTCAAGAAGAGTTAAGATCAATGGCGGGAGAGTTACAGAACCGGGCGCAGATCTTACGGGAAATTGAAGCTCGTAACGAAGTTTTAGAAGGAGAGATACAAAAGCAAATTGAGGAGAACAAAAATCTTAACGTGATCAACGTATCTTCTAGCGTTTCATTGAAAGAAATGCAGGCTGCGATCAGTAGCTTAAAAGACGTCAACGGGAAGCTCGAGGAAGAGGTTGAGCTTCGAGTTGACCAAAGAAACGCTCTTCAGCAAGAAATATACTGTTTAAAAGAGGAACTAAAAGAACTGAACACGAAGCATGGGTCGATTTTGGAGCAAGTTGCTTATATCGGGTTGAACCCAGAAAGCTTCGGGTCATCGGTAAAGGAGTTGCAAGATGAAAACTTGAATTTGAAAAAAGAACGGCAAACAGAAAAGGCTGCAAAAGAAGCGTTGCTGGAGAAATTGGAAATCATGGGTCAACTACTCGAAAGAAATGTTGTTTTGGAGAATTCATTATCGGATTTGGGTGCTGAGTTAGAAGGGGTACGGGGTAAGTTAAAGTCACTTGAAGAATCTTATCAATCGCTTTCGGAAGAAAAATCTAATATCACTGTCGAAAAGGCGAATTTGTTAGGTCAGTTACAAGTAACAACTGATAATTTGAGTCAAGTTTCGGAGAAGAACACTGTTCTCGAGAATTCCCTTTTCGATGCGCATGTCAAACTTGAAATCTTGAAGCAAAAGTCGAAGAGTTTCGAAGAGTCGTGTCAATTGCTTGCTGATGAAAAGTCTGCACTTATAAGTGAAAAGGGTACTCTGATATCGCAGATGGAAATTACCGAAAAAACTTTAGAGGATCTGAAGATGAAATACACAGATTTAGAAGAGAAATATTCATTAATGGAGAAAGAACGAGAGTCGACGCTACAAAAAGTCGAAGATTTGAATGTATCATTGGCTTTACAAAATCAAGAACATGTTACTTTTGCCGAAAAGAACGAGAAAAGTTTGCGTGCAATGAGAAGCGAAATTCAACTCCTGCAAGACGAAAGTCAAAATAAAAACAAAGAATTTGAAGAAGAATTAGATAAAGCGTTCGGTTCTGAAATCAACATCTTCGTCTTGTTGAAATGCATACAAGATCTCGAAGAAAATAACCAATCTTTGTTCAATGATTATCATAAACTCCAAGAGGCATTAAAATTGTCTGAAAGTCTGATTCATGTGTTGAAGCAAGAGAAAACGGAAGACCAGATAAACATCAAATCTTTATCTGATCAAAACAGTAGACTGAAGAACGGAATGCATCGGTTGTTGAAATTTGCTGGTCTTTCTTTACACTCGGGACCTGAAAACGGGAAGGAACAAACTTATTTCGATTGTATACAGAAAACATTTGAGGGTACGAACTGTGCACTAATCGAAAATGAAGAGAAAAACATGAAGTTAGTTGTTGAAATGTCTATTTTAGTCGCACTTTTGAGGCAACTCAAAACAGAAGTGACGGACCTTGAGGCAGAAAAGCGTGTTATTCAACAGGAGCTGAGTGTTCGGGCTGGAAAGATTCTCGAGTTGCAAAATGAGGCTCGGGAAATGTCGGAAGTGAATGAAGGGTTGAGACGTAAAGTGATTGAAGGGGATATTAATGAATCAGGGCTAAGAACTCAGCTAGAGAATATACAGTGTGAGTTGTCGGTTGTTCAAGAAGCTTTCAGAACGTTACAGATGGAGAACTCGGTTGTTGTTGAAGAAAAGAAATCTTTGTTGGAAGATAACTTTGATATCAAGAACAAGCTTCGTGCTTCGGAAGAAGAAAACGACGTCGTTTTGACTGAGGTTTTAAGTCAAAGTATCTTCTCCGAAACTTTGAAGAGTTACATCGACGAGAAACATGAAGAAATATCTATGGTTGAGAAGAAATTGGAAGAGGTGGGAAAGGAAAATATTGATCTTAAAACGACTTTGGAAAAATCCGAACACGAACTGAAAACGGTTATATTTGTGCGTGATCAATTGGATTCGGATTTAGCGAGCAGAAGTAATTTGCTGCAATCAAAAGAAGAGGAACATAAGGAAGCAGTCCAACAAATAATGATTTTAGAGAATGACAAAAAAGAGTTGTCCGAAACGTTAGCCGATCTGCAGAGGGAAAACAACGAGGTTAAAACGGCAAACGAACAACAAGGGAAACAAATTCTCCAACTTTTACAAGACAATGATCATTTGAGTAAAGAAAACAACACATCGGAGGTTAGAATGCAACGACTGACGGAAAGTCTGGAAAAAACGAAGGAAAAGGCTCGATTCTTGGAAACAGAAGGATCAATATATTATGATGATTTGCAGACTTCCGGCATTTATCAAGTTTTATTAGAAGAGAAGATCCGTGAGCTTACTGAAGTTTGTTCGAATCTTCAAGAAGAAAATAATTCCAAAGATGCGAGTCAAGAACTGCTTAAAGAAAAAGCCGACGTTTTGGAATGTGAGAATGGTGATCTTAAAGCTACTTTGGCTGCGTATGGTCAAGCCGTTGAATCTTTGAAGGACAGCATCGTATCGTTGGAAGATCATACGACTATCAGAACCAAAGTCCCAGAATCCGATAATGAAGACACAAAGGGTGACGATGCGTTCGTGGAGTTGCTGGATCTTCAAAGTAAGGTTAAAGTTATTGAAATGGCGGTAGTCGAAATGCAAATGCGATCAACGCAACAGAAGTTGGATTCAGATGCAAAGCTGGAATCCGCAATGAAGCAGATTGAAGAGCTGAGTTCTCGAAAGAATTCCCGCGGTAAACCAAAGTCGAGATCGGAAATATCGGAAGCAGATCCGAAAGATATCATGCTGGATCAAGCCTCGGAATGTTCATCATACAATGTGAGCAAAAGAGGAACAATCGACGGTGAGATTTGGGAAACTGCGAATGATTCCAAAACTATGTACAAACACAATCCAACCGCTTCAGACGTGTCGCTCGATAACATAGTGGATAAGCTAGAAGTTTCTAGAAGAATCAAGGAGTCTCGTGGTGATGACGAAAGCAAGCGGAAAGTTCTGGAAAGACTGAATTCCGATGTTCTAAAGTTGACCAATCTTCAGATTACGATTGAGGATTTGAAACGGAAAGTTGAGATCACGTTAAGGAGCAGACGAGGAAAAGCAATGATCGAATGCGAGACACTAAAAGGCCAACTAATGGAAGCCGAATCTGCTATCCAGAAGCTATACGAGCTAAACGGGAAATTTGTGAAACAAATAGAAGGCATCGATGGCGACGGTGGAGAGAATGAAAGTATGAGAAGAAAGAAGGTGTCGGAACAAGCGAGAAGGGTGTCGGAAAAGATCGGTCGGTTGCAGTTAGAGATACAGAAGATACAGTTTGTGTTGTTGAAACTCGACGATGAAAGTGAAGCAGCAGGAAGAGCGAGGTTTCTGGACGGCAGTAAACGGGTTCTTTTGAAAGACTATCTTTATGGCGCCGGAAGAACTAAAGCGAGCGTTAGCAGCAGGCGGAAGAAAGGGCATTTCTGCGCATGCGTCGAGCCTTCGACTAAAGGCGATTGA | 4899 | 40.72 | MASLSKADSRRMYSWWWNSHISPKNSKWLQENLTDVDIKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEELYRAYRALAERYDHATGALRQAHKTMTEVFPNQVPAGCDDSTTNSPYDTDPQTPDSRTTTNPCFDSDDFRKDGSTGTARKALNFDDSEDVNSDKNGTHDRNLSQFESVGVDDKEILLLKEALAKLEDEKEAGLKQYIESLDRLSKLESEILKSQEESRELADRASKAEAESQSLKDMLQKLEAEKEESLDLYHQAEKKIEEINEQNLKEEISRLEDERDAAYDQYKQSLNLISDLEKKLLEAEKEIEALKLAIAKLTEEKEAQTVLYQKCMETIASLELRLVCAEEETEKLKAEIDNGVLLLKGAEEQRLILEKSNKSLHLELESMEVKISSQSQEITEKQKELGRLWTCIQEERLRFVEAETAFQTLQQLHAQSQEELRSMAGELQNRAQILREIEARNEVLEGEIQKQIEENKNLNVINVSSSVSLKEMQAAISSLKDVNGKLEEEVELRVDQRNALQQEIYCLKEELKELNTKHGSILEQVAYIGLNPESFGSSVKELQDENLNLKKERQTEKAAKEALLEKLEIMGQLLERNVVLENSLSDLGAELEGVRGKLKSLEESYQSLSEEKSNITVEKANLLGQLQVTTDNLSQVSEKNTVLENSLFDAHVKLEILKQKSKSFEESCQLLADEKSALISEKGTLISQMEITEKTLEDLKMKYTDLEEKYSLMEKERESTLQKVEDLNVSLALQNQEHVTFAEKNEKSLRAMRSEIQLLQDESQNKNKEFEEELDKAFGSEINIFVLLKCIQDLEENNQSLFNDYHKLQEALKLSESLIHVLKQEKTEDQINIKSLSDQNSRLKNGMHRLLKFAGLSLHSGPENGKEQTYFDCIQKTFEGTNCALIENEEKNMKLVVEMSILVALLRQLKTEVTDLEAEKRVIQQELSVRAGKILELQNEAREMSEVNEGLRRKVIEGDINESGLRTQLENIQCELSVVQEAFRTLQMENSVVVEEKKSLLEDNFDIKNKLRASEEENDVVLTEVLSQSIFSETLKSYIDEKHEEISMVEKKLEEVGKENIDLKTTLEKSEHELKTVIFVRDQLDSDLASRSNLLQSKEEEHKEAVQQIMILENDKKELSETLADLQRENNEVKTANEQQGKQILQLLQDNDHLSKENNTSEVRMQRLTESLEKTKEKARFLETEGSIYYDDLQTSGIYQVLLEEKIRELTEVCSNLQEENNSKDASQELLKEKADVLECENGDLKATLAAYGQAVESLKDSIVSLEDHTTIRTKVPESDNEDTKGDDAFVELLDLQSKVKVIEMAVVEMQMRSTQQKLDSDAKLESAMKQIEELSSRKNSRGKPKSRSEISEADPKDIMLDQASECSSYNVSKRGTIDGEIWETANDSKTMYKHNPTASDVSLDNIVDKLEVSRRIKESRGDDESKRKVLERLNSDVLKLTNLQITIEDLKRKVEITLRSRRGKAMIECETLKGQLMEAESAIQKLYELNGKFVKQIEGIDGDGGENESMRRKKVSEQARRVSEKIGRLQLEIQKIQFVLLKLDDESEAAGRARFLDGSKRVLLKDYLYGAGRTKASVSSRRKKGHFCACVEPSTKGD | 1632 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr12g01637 | 1632 | Coils | Coil | 1546 | 1566 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1191 | 1218 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 467 | 494 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1474 | 1494 | - | - | |
| Amtr12g01637 | 1632 | MobiDBLite | consensus disorder prediction | 110 | 137 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1503 | 1523 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 932 | 959 | - | - | |
| Amtr12g01637 | 1632 | ProSiteProfiles | Networked (NET) actin-binding (NAB) domain profile. | 13 | 93 | IPR011684 | GO:0003779(InterPro) | |
| Amtr12g01637 | 1632 | MobiDBLite | consensus disorder prediction | 105 | 175 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1030 | 1050 | - | - | |
| Amtr12g01637 | 1632 | MobiDBLite | consensus disorder prediction | 1366 | 1395 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 502 | 550 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 967 | 987 | - | - | |
| Amtr12g01637 | 1632 | PANTHER | PROTEIN NETWORKED 4A | 279 | 985 | IPR051861 | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 572 | 599 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 824 | 858 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1002 | 1022 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 397 | 417 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 687 | 707 | - | - | |
| Amtr12g01637 | 1632 | MobiDBLite | consensus disorder prediction | 156 | 174 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1072 | 1106 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 722 | 756 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 189 | 209 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 617 | 651 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 217 | 368 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1233 | 1260 | - | - | |
| Amtr12g01637 | 1632 | Pfam | KIP1-like protein | 14 | 87 | IPR011684 | GO:0003779(InterPro) | |
| Amtr12g01637 | 1632 | Coils | Coil | 775 | 809 | - | - | |
| Amtr12g01637 | 1632 | Coils | Coil | 1128 | 1176 | - | - | |
| Amtr12g01637 | 1632 | MobiDBLite | consensus disorder prediction | 1366 | 1393 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr12g01637 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr8:36027595 | Amtr12g01637 | Amtr-Chr12:38767291 | dispersed | |
| Amtr | Amtr-Chr9:89086306 | Amtr12g01637 | Amtr-Chr12:38767291 | dispersed | |
| Amtr | Amtr-Chr11:57880544 | Amtr12g01637 | Amtr-Chr12:38767291 | dispersed | |
| Amtr | Amtr-Chr12:15807234 | Amtr12g01637 | Amtr-Chr12:38767291 | dispersed | |
| Amtr | Amtr-Chr12:29728346 | Amtr12g01637 | Amtr-Chr12:38767291 | dispersed | |
| Amtr | Amtr-Chr12:38767291 | Amtr07g04529 | Amtr-Chr7:95067311 | transposed |