AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g01661 ATGGATTCCATTCCCTCTCCTTCCACACCCAAACGCTCCAAAGCCAAACCTCCATCCAATAACAATAATAATAATAATCATCAGTTAACAACCATGGACGCTCTATTAACCTCCTTCTTATCTCTCTCCGACTCGCCCTCCATCCACTCCTCCTTCGACCGCCTCATCCAATCCACCGACTCCGGTTCAGATCAAACCCGCTTGATCCAACGCGCTCTTCGCCTCGGTTCGCTTTTACTCGAAGCTGGCAACCGCTCTGCTCGCCGATGCTCTTCCCATCATAACGCCCTCGTTTGGCCCCTCTCTCCTGACCTCACTATCAAAATATTTTCCATGCTTGATACGCAAAGTGTGTGTTATGTTGCGGCTACATGCTCGTTCTTTCAGAAGTGTGCTATGGATCCTTTGTGTTTTGCAAACATTGACTTGGCTACATTAGTCCCTAAAGTCAACAATGCTGTGGTGTCAACGATGATCCATCGAGCTGGAGATGCACTTAAGTCTATAAGGCTTGGTGTATTGCCGGCTGTTCCTGCTCCTCCTTTTTTTTCCTCTCAACCGCTAGTTTATAGCATTAGGAATGCAAACGACGCATCGGGAATTTCATGGAATGACAAGAGGTCTAGGCAAGGGAAGGAATCTTCCATTCTAACAAGGTCCTGTCTGAATTCTTTGAGTAGCGATGGCGGTGCACCTGGGTATGGGGTTTATTTGAGAAGATTACACCTTTTCAACATTGAAAGAATGGACAATGCATCCCTATTGGCGTCATTATCAGCTTGCCCATCTCTCCTTGATCTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCACACATTGGAGTCAATAAGTAGAAACTGTCCCTTGATAGAACGTTTGGTTTTTGAATCATCAAAAACAGGTAGAGATGATGGTCTGAAATTCCCAACCTGCAATGAATTTGTCCTCAACTGTCCTAACATAACCACTTTAGCACTAAAAGGATTTAAGCTACATGACTACAAGGCTCGTATGCTGGTAAAGGGCTTGCGAAGATTGAAACATCTTGATCTTTCAACATCTTACTCATTCACCGGTGCATTTTTAAAGAATGTTAGTGGCAATGGTGGTGGTGATAACTTGGAGGTGATGATCTTACAGGACTGTGTGCATCTAAAGGATATTGAAGTCGAGCGGTTTATGGCAGCTGTTCTTGCAGGGGAATTCAGGCTCCTTAGACATCTTGATATATCTAACAGGGAAGGTCTAGCATGTGACGGTGACTGGAGCAATCGATGTTACGATGCGAGTTTTATTCCTATACAGCAATTATTGGAACAGAGGCCTGATTTTTGTCTGGTTGCTGAATTCCCGAAAGGAAGTTACAATGACATTGATCAAATGACAGGCAGTGATGTAAGTTTAGCATCACAGTCAAACAGTAGCCATACATCTGATGGATCAAGCACATCAGACGGTAGTTATAATAGTGACCATGGTAGTGGTAATGAGTACGGTAGAGAAAGCGGTTCTTCATTCTACGAAGAAAATTCAGACTACCTCCTAAGTTGA 1551 43.97 MDSIPSPSTPKRSKAKPPSNNNNNNNHQLTTMDALLTSFLSLSDSPSIHSSFDRLIQSTDSGSDQTRLIQRALRLGSLLLEAGNRSARRCSSHHNALVWPLSPDLTIKIFSMLDTQSVCYVAATCSFFQKCAMDPLCFANIDLATLVPKVNNAVVSTMIHRAGDALKSIRLGVLPAVPAPPFFSSQPLVYSIRNANDASGISWNDKRSRQGKESSILTRSCLNSLSSDGGAPGYGVYLRRLHLFNIERMDNASLLASLSACPSLLDLEIVGLHVELRHTLESISRNCPLIERLVFESSKTGRDDGLKFPTCNEFVLNCPNITTLALKGFKLHDYKARMLVKGLRRLKHLDLSTSYSFTGAFLKNVSGNGGGDNLEVMILQDCVHLKDIEVERFMAAVLAGEFRLLRHLDISNREGLACDGDWSNRCYDASFIPIQQLLEQRPDFCLVAEFPKGSYNDIDQMTGSDVSLASQSNSSHTSDGSSTSDGSYNSDHGSGNEYGRESGSSFYEENSDYLLS 516
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g01661 516 SUPERFAMILY F-box domain 91 143 IPR036047 GO:0005515(InterPro)
Amtr12g01661 516 Gene3D Ribonuclease Inhibitor 201 414 IPR032675 -
Amtr12g01661 516 MobiDBLite consensus disorder prediction 466 516 - -
Amtr12g01661 516 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 101 391 - -
Amtr12g01661 516 MobiDBLite consensus disorder prediction 1 28 - -
Amtr12g01661 516 SUPERFAMILY RNI-like 237 412 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g01661 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr8:132959184 Amtr12g01661 Amtr-Chr12:39480287 dispersed