AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g01663 ATGGTCTCTCTACGCTTCCCCTTCTTCTCTCACACCACAACCACGCGCTTCCCGTCCCTCACATTTTCTCCGGCAACCATCGCCTGCTCCGTCGCTGTCTCCGCCGCAGTCGGCGGCGCCATTTCCATCTCCGCCAATCCATCACTTCTCAACTCCTTCATCTCCAATCCCTCACACTCTTCTCCTCTATTTGGATCACTCTCTCTCTCCGACGCTCCTGCCAACATAATAACTGAATCGAAGACCGGTGTCTCGTTTCCCGCGGTTTTGAATGGCTCCAAGGGGCTGTTAGGGATTGGATTGAGACGGAAGGCGGTTTTTGGACTGAAAAACATCGATGTTTACGCTTTTGGTGTATATGCTGGTGATAATGATATAAAGAACTTTATAAGTGAGAAATATGGAACACTCTCAACAACTGAACTGAAGAACAAGGACATCACTCAAGATTTGATGGAGAGCGATGTAAGTGTTACAGTTAGGCTGCAAATAGTTTATGGAAAGCTCAGCATTCGGTCTGTTCGTAATGCTTTTGAAGATTCCGTGGGAAGCAGATTGAAAAAGTTTGGTGGATCTGACAACAAGGAGTTGCTTCAAAAGTTCACTTCTCAGTTTAGAGACGAATACAAGATACCTCGGGGATCTATCATCGACCTTTCAAAGGAAAAAGGCTATGTGCTCCGGACCGCTATTGATGGCAAAGAGATAGGAAGTGTCGAGAGCCAACTGTTATGTCGGTCACTCTTGGATCTTTACATTGGTGACGAGCCATTTGATTCAAAAGCAAAAGAAGAAATCGACCTCAAACTGGTTTCCGCTGTTACAAAGTAA 831 45.85 MVSLRFPFFSHTTTTRFPSLTFSPATIACSVAVSAAVGGAISISANPSLLNSFISNPSHSSPLFGSLSLSDAPANIITESKTGVSFPAVLNGSKGLLGIGLRRKAVFGLKNIDVYAFGVYAGDNDIKNFISEKYGTLSTTELKNKDITQDLMESDVSVTVRLQIVYGKLSIRSVRNAFEDSVGSRLKKFGGSDNKELLQKFTSQFRDEYKIPRGSIIDLSKEKGYVLRTAIDGKEIGSVESQLLCRSLLDLYIGDEPFDSKAKEEIDLKLVSAVTK 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g01663 276 Gene3D - 79 252 IPR016088 -
Amtr12g01663 276 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Amtr12g01663 276 Gene3D - 125 266 IPR016089 -
Amtr12g01663 276 Pfam Chalcone isomerase like 96 266 IPR016087 -
Amtr12g01663 276 SUPERFAMILY Chalcone isomerase 79 272 IPR036298 GO:0016872(InterPro)
Amtr12g01663 276 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 274 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g01663 - -