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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr12g01673 ATGGAGTCCAACAAACAACATGAACAACCTACTACCTCCGTGAGACGAAGCTTGAAGAGGAAGCTAGAAGATGAATTCCTCCTAGATCGATCCATCACAACGTCTTCTGATGACTCTTCCTCCCTTGCTCAACAAGATCTAGCCTCTGAAGTCCTCTCTCAGGTCCATATCCTTCACTCCACTTCCTCATCATCTGAATCAGATCGTGCGCTTATCAAACGCTCCATTCATATCCTCTCCGAACTCGCTAAAAACGAGGATATTGTGAATTTGATTGTTGAATCGGGAGCGGTTCCGGCGCTTGTACGGCATCTTGAAGCCCCGGATTGGAAGGACGGTGTGGAAGGAAGGCCATATGAGCATGAGGTGGAGAAGGGAAGTGCTTTTACGCTTGGACTTCTTGCTATAAAGCCTGAGCATCAACAACTCATTGTTGATGCTGGAGCTCTACCGCATCTTGTTGCTCTGCTTAAGAGACACAGGGATGGTGAAAACTCTCGAGCAGTCAACGGTGTTATAAGAAGAGCAGCAGATGCAATTACAAACCTTGCTCATGAGAATAGTAGCATCAAGAGCCGTGTTAGGGTCGAAGGCGGAATCCCCCCTCTTGTTGAATTGCTTGAATTCGTTGATGCTAAGGTGCAGAGAGCAGCTGCAGGGGCCCTGCGTACTTTAGCTTTCAAAAATGATGAAAACAAAACTCAGATAGTGGACTGCAATGCTTTGCCTACTCTTATTTTAATGCTCCGGTCTGAAGATGCAGCAATTCACTATGAAGCAGTTGGTGTAATTGGGAATCTTGTCCACTCATCCCCCAACATAAAGAAGGAAGTTCTTCTTGCTGGAGCGTTACAGCCTGTAATTGAATTGCTTAGCTCAAGCTGTTCAGAGAGCCAACGTGAAGCTGCTTTATTGCTTGGACAGTTTGCTGCCGCCGATACAGATTGCAAGGTTCACATAGTTCAAAGAGGTGCTGTTGGTCCACTAGTTGAGATGTTGCAGTCACCAGATGCTCAATTAAGGGAGATGTCAGCGTTCGCCTTAGGAAGATTGGCACAGGATACTCACAACCAAGCTGGTATTGCACATGGTGGTGGCATACCTCCATTGTTGAAACTACTTGATTCTAGAAATGGTTCCCTGCAACACAATGCTGCATTTGCGTTATACGGTCTTGCTGATAATGAGGATAATGTTGCTGATCTTATAAGGGTTGGTGGGGTACAAAAGCTGCAGGATGGTGAATTCATTGTCCAACCAACTAGGGATTGTGTGGCCAAGACATTAAAAAGACTCGAGGAGAAGATTCATGGACGGGTATTGAGCCATTTGTTGTACCTAATGCGGATTGCTGAGAGATCTGTTCAGAGACGAGTTGCTTTGGCTCTTTCCCATCTTTGTTCACCAGATGACCAGAAAACAATATTCGTCGATGCCAATGGATTATCCATTCTCTTAGAGCTTTTAGAATCAAACAGTTTAAAACATCAACGAGATAGTTGCGCAGCCTTGTGCAAGTTGGCTGAAAAAGCCAGTTCGCTGTCTCCTGTCGATGCGGGACCGCCATCTCCAATATCTCAGGTATATTTAGGCGAGCAGTATGTGAACAACCCTACGTTATCTGATGTGACTTTCCTAATTGAAGGCAAACGCTTCTATGCTCACAGAATTTGTCTTCTTGCTTCTTCTGATGCGTTCCGGGCAATGTTTGATGGGGGGTACAAGGAGAGAGATGCTAAAGACATCGAGATTCCAAATATTAGATGGGATGTCTTTGAGTTAATGATGAGATACATTTATACCGGGTCCGTAGATGTGAATCTGGAAATTGCTCAGGATCTTCTTAGAGCTGCAGATCAATATCTTCTGGAGGGGCTAAAACGCCTCTGTGAGTACACCATTGCTCAGGATATACGGATCGACAATGTGTCAGTTATGTACGACTTATCAGAGGCCTTCAATGCTGTGTCACTAAGGAACGCATGCATTCTATTTGTTCTGGAGAATTTCGACAAATTAAATGCAAAATCATGGTATGGGGAATTGATCAAGCGTATATTGCCAGAGATGCGCGATTACTTTGTGAGGACACTTGGAAGGGCAGTGGAAGCTGACATGAGGCAATAG 2127 44.95 MESNKQHEQPTTSVRRSLKRKLEDEFLLDRSITTSSDDSSSLAQQDLASEVLSQVHILHSTSSSSESDRALIKRSIHILSELAKNEDIVNLIVESGAVPALVRHLEAPDWKDGVEGRPYEHEVEKGSAFTLGLLAIKPEHQQLIVDAGALPHLVALLKRHRDGENSRAVNGVIRRAADAITNLAHENSSIKSRVRVEGGIPPLVELLEFVDAKVQRAAAGALRTLAFKNDENKTQIVDCNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIELLSSSCSESQREAALLLGQFAAADTDCKVHIVQRGAVGPLVEMLQSPDAQLREMSAFALGRLAQDTHNQAGIAHGGGIPPLLKLLDSRNGSLQHNAAFALYGLADNEDNVADLIRVGGVQKLQDGEFIVQPTRDCVAKTLKRLEEKIHGRVLSHLLYLMRIAERSVQRRVALALSHLCSPDDQKTIFVDANGLSILLELLESNSLKHQRDSCAALCKLAEKASSLSPVDAGPPSPISQVYLGEQYVNNPTLSDVTFLIEGKRFYAHRICLLASSDAFRAMFDGGYKERDAKDIEIPNIRWDVFELMMRYIYTGSVDVNLEIAQDLLRAADQYLLEGLKRLCEYTIAQDIRIDNVSVMYDLSEAFNAVSLRNACILFVLENFDKLNAKSWYGELIKRILPEMRDYFVRTLGRAVEADMRQ 708
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr12g01673 708 Gene3D Potassium Channel Kv1.1; Chain A 532 676 IPR011333 -
Amtr12g01673 708 Pfam BTB-POZ domain 536 636 IPR000210 GO:0005515(InterPro)
Amtr12g01673 708 Gene3D - 420 523 IPR011989 -
Amtr12g01673 708 Pfam Armadillo-beta-catenin-like repeat 314 352 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 Pfam Armadillo-beta-catenin-like repeat 229 268 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 Pfam Armadillo-beta-catenin-like repeat 191 226 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 Pfam Armadillo-beta-catenin-like repeat 470 508 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 ProSiteProfiles BTB domain profile. 541 608 IPR000210 GO:0005515(InterPro)
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 271 311 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 469 509 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 85 136 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 354 394 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 427 468 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 229 269 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 313 353 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 137 185 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 SMART arm-5 187 227 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 703 IPR044282 -
Amtr12g01673 708 SUPERFAMILY ARM repeat 439 512 IPR016024 -
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 365 407 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 96 149 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 324 366 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 Gene3D - 36 211 IPR011989 -
Amtr12g01673 708 SMART BTB-4 541 638 IPR000210 GO:0005515(InterPro)
Amtr12g01673 708 CDD BTB-POZ-ARIA-plant 528 643 - -
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 198 233 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 ProSiteProfiles Armadillo-plakoglobin ARM repeat profile. 148 198 IPR000225 GO:0005515(InterPro)
Amtr12g01673 708 Gene3D - 212 414 IPR011989 -
Amtr12g01673 708 SUPERFAMILY POZ domain 532 635 IPR011333 -
Amtr12g01673 708 SUPERFAMILY ARM repeat 64 412 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr12g01673 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
12930 Amtr06g01815 Amtr12g01673
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Amtr Amtr-Chr7:96812093 Amtr12g01673 Amtr-Chr12:39648990 dispersed
Amtr Amtr-Chr12:39648990 Amtr06g01815 Amtr-Chr6:35823059 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Amtr01g01333 ACH 556 819 U-box gene family AT2G23140 33.824 4.42e-34 131.0
Amtr01g02504 . 10 612 U-box gene family AT1G23030 57.166 0.0 646.0
Amtr01g02824 . 353 494 U-box gene family AT5G67530 41.176 1.19e-27 108.0
Amtr01g03002 . 346 496 U-box gene family AT5G67530 51.656 3.84e-52 173.0
Amtr01g03123 . 5 435 U-box gene family AT3G52450 50.577 3.09e-148 426.0
Amtr01g03818 . 6 409 U-box gene family AT2G35930 46.136 6.28e-133 387.0
Amtr01g03959 . 7 402 U-box gene family AT2G35930 43.415 4.15e-109 325.0
Amtr01g04374 . 352 491 U-box gene family AT5G67530 42.763 5.72e-29 115.0
Amtr01g04444 . 1 421 U-box gene family AT3G19380 62.529 1.37e-174 493.0
Amtr01g04511 . 847 941 U-box gene family AT2G28830 71.134 4.65e-39 140.0
Amtr01g04525 . 847 941 U-box gene family AT2G28830 71.134 4.65e-39 140.0
Amtr01g04559 . 847 941 U-box gene family AT2G28830 71.134 4.65e-39 140.0
Amtr01g05678 . 495 827 U-box gene family AT2G23140 46.866 2.08e-80 260.0
Amtr01g05815 . 9 107 U-box gene family AT3G07370 31.0 1.47e-08 53.5
Amtr01g06081 . 56 96 U-box gene family AT5G42340 48.889 4.57e-06 45.1
Amtr01g06454 . 22 180 U-box gene family AT5G65500 32.075 9.93e-15 71.6
Amtr01g06683 . 248 459 U-box gene family AT2G33340 27.391 7.37e-07 50.8
Amtr01g06934 . 1 415 U-box gene family AT3G18710 41.763 1.71e-105 316.0
Amtr01g06989 . 10 405 U-box gene family AT2G35930 32.85 3.43e-67 217.0
Amtr01g07134 WGDA 9 94 U-box gene family AT3G07370 30.233 1.99e-07 50.1
Amtr01g07264 . 19 833 U-box gene family AT4G25160 51.829 0.0 816.0
Amtr01g07650 . 11 626 U-box gene family AT3G54850 64.019 0.0 769.0
Amtr01g07961 . 276 506 U-box gene family AT5G42340 27.311 3.07e-16 81.6
Amtr01g08509 ACH,WGDA 1 828 U-box gene family AT2G23140 53.993 0.0 802.0
Amtr01g08552 WGDA 18 448 U-box gene family AT3G49810 72.39 0.0 610.0
Amtr01g08678 WGDA 1 658 U-box gene family AT4G36550 35.745 2.73e-117 365.0
Amtr01g09125 WGDA 1 435 U-box gene family AT5G37490 46.032 3.60e-129 378.0
Amtr01g09169 . 390 585 U-box gene family AT3G46510 29.851 1.74e-09 61.2
Amtr01g09594 . 847 942 U-box gene family AT2G28830 71.429 8.02e-42 143.0
Amtr02g00571 WGDA 4 809 U-box gene family AT1G76390 63.715 0.0 985.0
Amtr02g00704 . 242 570 U-box gene family AT1G23030 29.261 6.91e-22 100.0
Amtr02g00918 WGDA 15 459 U-box gene family AT3G11840 38.413 3.31e-91 282.0
Amtr02g00943 WGDA 6 435 U-box gene family AT5G37490 42.342 2.07e-107 323.0
Amtr02g01205 . 10 620 U-box gene family AT1G71020 58.252 0.0 653.0
Amtr02g01294 . 371 504 U-box gene family AT3G46510 30.935 5.66e-08 54.7
Amtr02g01790 . 7 686 U-box gene family AT1G60190 44.524 0.0 565.0
Amtr02g01940 . 366 621 U-box gene family AT3G46510 23.106 3.36e-08 54.3
Amtr02g02658 . 541 809 U-box gene family AT2G23140 23.985 6.45e-12 66.6
Amtr02g02664 . 232 415 U-box gene family AT2G33340 27.128 7.74e-10 60.1
Amtr02g02908 . 1 421 U-box gene family AT1G49780 62.708 0.0 513.0
Amtr02g03103 WGDA 734 805 U-box gene family AT2G28830 43.269 2.86e-14 74.3
Amtr02g03341 . 230 398 U-box gene family AT1G71020 32.796 2.60e-19 91.3
Amtr02g03782 WGDA 28 435 U-box gene family AT5G37490 45.036 7.66e-115 342.0
Amtr02g04104 . 12 80 U-box gene family AT3G07370 36.232 2.63e-07 50.1
Amtr02g04109 ACH,WGDA 3 90 U-box gene family AT3G07370 36.364 6.58e-08 50.4
Amtr02g04395 . 8 128 U-box gene family AT3G07370 32.231 5.87e-15 68.9
Amtr02g04900 . 6 633 U-box gene family AT3G46510 38.724 2.07e-131 400.0
Amtr02g05017 . 22 833 U-box gene family AT4G25160 51.04 0.0 794.0
Amtr02g05028 . 613 796 U-box gene family AT5G51270 64.13 5.82e-81 254.0
Amtr02g05029 . 672 834 U-box gene family AT4G25160 53.333 2.12e-55 184.0
Amtr02g05145 ACH,WGDA 9 94 U-box gene family AT3G07370 31.395 3.53e-08 52.4
Amtr02g05363 WGDA 10 668 U-box gene family AT4G36550 37.127 4.83e-119 372.0
Amtr02g05680 . 353 477 U-box gene family AT5G67530 48.529 1.51e-30 114.0
Amtr02g06097 . 353 480 U-box gene family AT5G67530 49.64 8.30e-34 123.0
Amtr02g06280 . 330 549 U-box gene family AT1G71020 25.11 3.64e-08 53.9
Amtr02g06918 ACH,WGDA 11 101 U-box gene family AT3G07370 34.066 1.59e-07 51.6
Amtr02g07089 . 532 825 U-box gene family AT2G23140 47.667 7.84e-77 250.0
Amtr02g07245 WGDA 14 181 U-box gene family AT4G36550 42.353 1.53e-37 147.0
Amtr02g07485 WGDA 33 541 U-box gene family AT5G65200 51.06 2.02e-163 474.0
Amtr02g07892 . 500 614 U-box gene family AT5G01830 39.13 2.40e-11 57.4
Amtr02g08087 WGDA 481 749 U-box gene family AT3G54790 37.722 3.04e-31 122.0
Amtr03g00741 . 357 492 U-box gene family AT5G67530 38.514 2.38e-17 84.7
Amtr03g00742 . 405 632 U-box gene family AT2G28830 28.755 4.92e-13 67.8
Amtr03g02232 ACH,WGDA 366 621 U-box gene family AT3G46510 23.755 2.78e-08 54.7
Amtr03g02526 ACH 6 410 U-box gene family AT2G35930 51.196 1.19e-146 421.0
Amtr03g02666 . 346 496 U-box gene family AT5G67530 46.358 5.61e-41 155.0
Amtr03g02767 . 668 830 U-box gene family AT2G45910 44.172 7.02e-40 140.0
Amtr03g02963 ACH,WGDA 325 424 U-box gene family AT2G33340 33.981 8.31e-08 52.4
Amtr03g04015 . 7 671 U-box gene family AT1G60190 39.201 9.22e-163 483.0
Amtr03g04835 WGDA 12 181 U-box gene family AT4G36550 41.279 7.94e-39 150.0
Amtr03g05149 . 503 827 U-box gene family AT2G23140 46.224 1.09e-80 260.0
Amtr03g05875 ACH 334 509 U-box gene family AT1G23030 32.597 1.17e-17 84.7
Amtr03g05949 . 237 434 U-box gene family AT2G33340 25.893 2.70e-11 63.5
Amtr03g06092 WGDA 33 544 U-box gene family AT5G65200 51.601 2.63e-161 469.0
Amtr03g06372 . 59 538 U-box gene family AT5G40140 51.02 5.02e-152 443.0
Amtr03g06595 . 1 444 U-box gene family AT5G65920 61.024 0.0 547.0
Amtr03g06790 . 559 711 U-box gene family AT2G23140 34.839 3.29e-10 63.5
Amtr04g00072 . 5 369 U-box gene family AT4G21350 59.673 7.41e-142 406.0
Amtr04g00154 . 6 405 U-box gene family AT2G35930 33.414 4.20e-69 223.0
Amtr04g00191 . 357 491 U-box gene family AT5G67530 29.861 3.23e-06 47.8
Amtr04g00256 ACH 544 823 U-box gene family AT2G23140 26.087 6.35e-18 85.5
Amtr04g00452 . 334 607 U-box gene family AT1G23030 34.256 4.46e-32 124.0
Amtr04g00570 . 1 726 U-box gene family AT1G29340 63.073 0.0 850.0
Amtr04g00720 . 345 496 U-box gene family AT5G67530 25.658 1.88e-13 67.4
Amtr04g01114 ACH 73 372 U-box gene family AT3G07360 38.284 9.05e-53 182.0
Amtr04g01166 . 276 462 U-box gene family AT2G33340 26.316 3.93e-10 60.5
Amtr04g01359 ACH,WGDA 259 459 U-box gene family AT2G33340 26.636 3.37e-10 61.6
Amtr04g01529 ACH 237 465 U-box gene family AT2G33340 25.856 1.88e-15 75.5
Amtr04g01634 . 4 647 U-box gene family AT3G46510 66.974 0.0 853.0
Amtr04g04857 . 227 474 U-box gene family AT2G33340 26.316 6.03e-08 52.0
Amtr04g05166 ACH,WGDA 366 621 U-box gene family AT3G46510 23.755 6.24e-08 53.5
Amtr04g05392 . 236 507 U-box gene family AT2G33340 28.723 9.29e-20 92.0
Amtr04g05814 . 8 410 U-box gene family AT2G35930 51.049 3.75e-150 431.0
Amtr04g06234 WGDA 325 422 U-box gene family AT2G33340 34.653 1.06e-07 52.4
Amtr05g00033 . 12 624 U-box gene family AT3G54850 61.301 0.0 724.0
Amtr05g00452 . 27 807 U-box gene family AT1G76390 26.768 1.36e-50 190.0
Amtr05g00596 . 43 832 U-box gene family AT2G45910 38.083 1.87e-176 523.0
Amtr05g01008 . 1 448 U-box gene family AT3G49810 59.867 0.0 516.0
Amtr05g01050 . 559 733 U-box gene family AT2G23140 33.898 5.95e-11 66.2
Amtr05g01149 ACH,WGDA 355 588 U-box gene family AT1G23030 21.429 3.48e-08 54.3
Amtr05g01368 . 353 495 U-box gene family AT5G67530 43.791 1.79e-29 112.0
Amtr05g01559 WGDA 1 515 U-box gene family AT2G33340 72.937 0.0 786.0
Amtr05g01903 ACH,WGDA 9 406 U-box gene family AT2G35930 56.359 5.12e-154 439.0
Amtr05g01904 . 5 406 U-box gene family AT2G35930 51.471 2.99e-140 404.0
Amtr05g02271 . 247 401 U-box gene family AT1G49780 31.737 2.47e-11 62.4
Amtr05g03380 ACH,WGDA 5 706 U-box gene family AT5G67340 47.114 0.0 611.0
Amtr05g03440 WGDA 18 448 U-box gene family AT3G49810 72.622 0.0 617.0
Amtr05g05564 . 53 660 U-box gene family AT5G42340 52.451 0.0 625.0
Amtr06g00016 . 4 811 U-box gene family AT1G76390 59.582 0.0 935.0
Amtr06g00199 . 4 829 U-box gene family AT2G23140 57.434 0.0 890.0
Amtr06g00236 . 20 448 U-box gene family AT3G49810 71.096 0.0 596.0
Amtr06g00996 . 12 635 U-box gene family AT3G46510 68.69 0.0 864.0
Amtr06g01148 WGDA 353 494 U-box gene family AT5G67530 43.137 4.01e-29 111.0
Amtr06g01351 ACH 1 460 U-box gene family AT3G07360 54.858 0.0 513.0
Amtr06g01467 ACH 236 449 U-box gene family AT2G33340 26.818 1.63e-12 68.9
Amtr06g01815 ACH 530 723 U-box gene family AT2G23140 33.673 1.05e-18 89.0
Amtr06g01851 . 355 477 U-box gene family AT5G67530 51.852 9.42e-34 134.0
Amtr06g01912 . 6 760 U-box gene family AT3G54790 46.85 0.0 577.0
Amtr06g02155 . 38 830 U-box gene family AT2G45910 34.188 8.22e-144 441.0
Amtr06g02297 ACH,WGDA 259 459 U-box gene family AT2G33340 28.037 3.06e-09 58.5
Amtr06g02498 . 834 960 U-box gene family AT2G28830 56.061 1.10e-37 135.0
Amtr06g02694 . 345 496 U-box gene family AT5G67530 27.632 1.92e-14 70.5
Amtr06g03080 . 563 819 U-box gene family AT2G23140 35.741 4.75e-39 146.0
Amtr06g03387 . 480 749 U-box gene family AT3G54790 35.587 1.81e-31 123.0
Amtr06g04107 . 3 410 U-box gene family AT2G35930 48.519 8.30e-142 409.0
Amtr06g05909 WGDA 353 491 U-box gene family AT5G67530 48.252 8.44e-35 129.0
Amtr06g06215 . 10 405 U-box gene family AT2G35930 32.598 2.39e-63 207.0
Amtr07g00316 . 543 822 U-box gene family AT2G23140 28.713 8.38e-22 96.7
Amtr07g00349 . 938 1012 U-box gene family AT5G15400 73.333 2.35e-31 115.0
Amtr07g00613 . 1 771 U-box gene family AT1G24330 57.969 0.0 880.0
Amtr07g00643 WGDA 353 494 U-box gene family AT5G67530 47.945 1.32e-35 131.0
Amtr07g00714 . 225 432 U-box gene family AT2G33340 24.255 2.39e-09 58.2
Amtr07g00929 . 204 414 U-box gene family AT2G33340 23.684 1.91e-06 47.8
Amtr07g01194 WGDA 544 820 U-box gene family AT2G23140 34.722 5.74e-32 125.0
Amtr07g01193 . 543 820 U-box gene family AT2G23140 35.294 2.30e-30 120.0
Amtr07g01195 . 544 820 U-box gene family AT2G23140 35.069 1.30e-32 127.0
Amtr07g01273 ACH 12 80 U-box gene family AT3G07370 37.681 5.70e-08 52.8
Amtr07g01894 . 237 524 U-box gene family AT2G33340 24.308 9.99e-07 51.6
Amtr07g01897 WGDA 233 423 U-box gene family AT2G33340 25.0 3.32e-08 53.9
Amtr07g02047 WGDA 413 739 U-box gene family AT1G24330 26.225 3.59e-22 98.2
Amtr07g02888 WGDA 516 742 U-box gene family AT2G23140 32.203 1.22e-17 86.3
Amtr07g02950 . 346 500 U-box gene family AT5G67530 53.846 6.49e-55 180.0
Amtr07g02969 ACH 549 818 U-box gene family AT2G23140 26.667 1.87e-12 68.2
Amtr07g03585 . 14 81 U-box gene family AT3G07370 39.706 4.18e-09 55.5
Amtr07g04823 . 2 1038 U-box gene family AT5G15400 72.736 0.0 1573.0
Amtr07g05073 . 465 707 U-box gene family AT1G67530 32.806 5.71e-20 89.0
Amtr07g05308 . 351 493 U-box gene family AT5G67530 45.161 2.96e-32 125.0
Amtr07g05494 ACH 4 829 U-box gene family AT2G23140 53.902 0.0 827.0
Amtr07g05706 ACH 563 819 U-box gene family AT2G23140 35.361 3.58e-37 140.0
Amtr07g05936 . 1 656 U-box gene family AT5G01830 54.6 0.0 694.0
Amtr08g00495 ACH 334 576 U-box gene family AT1G23030 27.236 3.90e-14 73.6
Amtr08g00562 . 101 433 U-box gene family AT1G04510 25.36 5.46e-20 91.3
Amtr08g01885 WGDA 353 475 U-box gene family AT5G67530 46.269 6.65e-29 110.0
Amtr08g02471 . 1 276 U-box gene family AT3G07370 63.309 1.30e-130 370.0
Amtr08g02472 . 1 460 U-box gene family AT3G07360 56.356 0.0 516.0
Amtr08g03505 . 1 595 U-box gene family AT5G67530 74.376 0.0 891.0
Amtr08g04094 . 103 200 U-box gene family AT3G07370 46.939 1.54e-23 89.7
Amtr09g00020 . 357 492 U-box gene family AT5G67530 39.865 4.88e-20 92.8
Amtr09g00470 . 11 411 U-box gene family AT2G35930 53.285 8.83e-150 429.0
Amtr09g00471 ACH,WGDA 4 406 U-box gene family AT2G35930 56.553 1.10e-163 464.0
Amtr09g01030 WGDA 1 515 U-box gene family AT2G33340 69.482 0.0 753.0
Amtr09g02912 . 1 623 U-box gene family AT1G71020 58.029 0.0 668.0
Amtr09g03133 . 237 1022 U-box gene family AT1G68940 48.005 0.0 739.0
Amtr09g03148 . 237 1022 U-box gene family AT1G68940 48.07 0.0 742.0
Amtr09g03240 WGDA 6 431 U-box gene family AT1G66160 41.964 5.82e-107 322.0
Amtr09g03254 WGDA 20 461 U-box gene family AT3G11840 39.735 2.29e-96 295.0
Amtr09g03257 ACH 337 395 U-box gene family AT5G67530 39.437 7.15e-07 43.5
Amtr09g03741 WGDA 4 809 U-box gene family AT1G76390 59.975 0.0 937.0
Amtr09g04310 . 353 475 U-box gene family AT5G67530 47.015 5.34e-28 109.0
Amtr09g04792 ACH 9 94 U-box gene family AT3G07370 27.907 1.61e-06 47.4
Amtr09g04881 . 260 372 U-box gene family AT2G33340 33.621 1.75e-07 52.4
Amtr10g00043 . 376 491 U-box gene family AT2G28830 33.333 2.60e-07 52.0
Amtr10g00638 . 145 797 U-box gene family AT1G20780 27.786 2.34e-44 170.0
Amtr10g00705 . 25 797 U-box gene family AT1G20780 27.969 4.05e-56 207.0
Amtr10g01323 WGDA 439 740 U-box gene family AT1G67530 28.852 3.66e-20 91.3
Amtr10g01537 . 336 592 U-box gene family AT1G23030 23.162 8.69e-08 53.1
Amtr10g01642 . 541 823 U-box gene family AT2G23140 47.297 2.50e-72 243.0
Amtr10g01914 . 53 660 U-box gene family AT5G42340 58.24 0.0 703.0
Amtr10g02058 . 353 491 U-box gene family AT5G67530 40.667 3.41e-27 107.0
Amtr10g02097 . 353 477 U-box gene family AT5G67530 48.529 4.01e-30 113.0
Amtr10g03067 . 353 494 U-box gene family AT5G67530 41.176 1.28e-26 105.0
Amtr10g03202 . 436 823 U-box gene family AT2G23140 40.347 3.66e-74 249.0
Amtr10g03670 WGDA 438 760 U-box gene family AT1G67530 28.528 1.53e-23 101.0
Amtr10g03843 . 103 200 U-box gene family AT3G07370 46.939 4.12e-24 91.7
Amtr10g03896 . 237 514 U-box gene family AT2G33340 32.862 1.29e-37 144.0
Amtr10g04580 . 883 960 U-box gene family AT2G28830 58.974 1.91e-24 93.6
Amtr11g00323 . 350 501 U-box gene family AT5G67530 40.0 3.74e-32 129.0
Amtr11g00636 WGDA 234 422 U-box gene family AT2G33340 27.317 5.29e-09 56.6
Amtr11g00824 WGDA 541 819 U-box gene family AT2G23140 30.272 5.31e-25 107.0
Amtr11g01636 . 26 766 U-box gene family AT1G76390 27.527 4.92e-38 151.0
Amtr11g01689 WGDA 516 742 U-box gene family AT2G23140 32.773 6.82e-21 96.7
Amtr11g01915 . 43 832 U-box gene family AT2G45910 50.709 0.0 827.0
Amtr11g02138 . 257 326 U-box gene family AT3G46510 53.521 1.05e-17 87.0
Amtr11g02637 . 340 490 U-box gene family AT5G67530 47.097 7.27e-41 142.0
Amtr11g02898 . 237 517 U-box gene family AT2G33340 21.0 4.31e-08 53.5
Amtr11g02988 . 366 621 U-box gene family AT3G46510 23.372 1.52e-09 58.5
Amtr11g03161 . 1 421 U-box gene family AT3G19380 58.491 8.51e-160 454.0
Amtr11g03384 ACH 12 80 U-box gene family AT3G07370 39.13 4.69e-08 53.1
Amtr11g03786 WGDA 734 805 U-box gene family AT2G28830 45.192 4.13e-16 80.1
Amtr11g03787 WGDA 734 805 U-box gene family AT2G28830 42.308 3.52e-13 70.5
Amtr12g01055 ACH 236 445 U-box gene family AT2G33340 30.374 4.14e-17 83.6
Amtr12g01090 . 264 421 U-box gene family AT1G04510 25.263 6.41e-08 52.8
Amtr12g01106 ACH 1 460 U-box gene family AT3G07360 52.929 1.21e-162 465.0
Amtr12g01107 . 1 276 U-box gene family AT3G07370 62.007 6.42e-129 365.0
Amtr12g01465 ACH 233 464 U-box gene family AT2G33340 24.812 9.03e-13 67.4
Amtr12g01673 ACH 530 787 U-box gene family AT2G23140 26.923 2.26e-14 75.1
leaf

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Amtr BTB 1.7e-25 CL0033 TR TRAF