Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla11g00194 | ATGAAATTCGGCAAGCGGTTGAAGCAACACGTTCAAGAAACGTTGCCTGGGTGGCGGGATATGTATTTGAACTACAAAGATTTGAAGAAGCTCGTGAAGCTCATATCGGAGTGCGGGAAATCAGAGGCCGCGTTTGTGTATCTTTTGAATAATGAGATCGATAAGTTTAACTTGTTTTTCATGGAACAAGAAGAGGATTTCGTTATTCGTCATAAGGAGTTGCAACAAAGAATAAAGAGGGTGAAAGAGGGGGAACCATCTTCAGGAGAGTATGAAGAAGAGATGTCAAGAATCAGAAAAGACATAGTTGACTTTCATGGTGAAATGGTTCTTTTAGTCAACTATAGCAACATCAATTACACTGGAATGGCAAAGATTCTTAAGAAATACGACAAACGAACCGGAGGGCTATTGCGTTTGCCGTTCATCCAAAAGGTCTTGGAGCAACCTTTCTTCACCACGGACCTCATTTCGAAGCTTGTGAAAGAATGCGAAACCACAATCGACGAGCTTTTTCCAATGGTGGTGGTGGAGGAGGAGATGAAAGAGTCGACGGCAATCACGATGGCAGGAGAAGGGATTTTCAGAAACACGGTGGCGGCATTGATGACAATGAAAGAGATTAGGAAAGGGAGCTCGACTCAGAGTCATTTCTCTCTCCCGGCTTTAAATTTGCCGGATACTGAGCTTATTCGATCTTTTCAATTCAACGCCCCAATACCCATCATTTGA | 732 | 43.03 | MKFGKRLKQHVQETLPGWRDMYLNYKDLKKLVKLISECGKSEAAFVYLLNNEIDKFNLFFMEQEEDFVIRHKELQQRIKRVKEGEPSSGEYEEEMSRIRKDIVDFHGEMVLLVNYSNINYTGMAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECETTIDELFPMVVVEEEMKESTAITMAGEGIFRNTVAALMTMKEIRKGSSTQSHFSLPALNLPDTELIRSFQFNAPIPII | 243 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla11g00194 | 243 | Pfam | SPX domain | 93 | 145 | IPR004331 | - | |
| Arla11g00194 | 243 | Pfam | SPX domain | 1 | 36 | IPR004331 | - | |
| Arla11g00194 | 243 | CDD | SPX-AtSPX1-like | 2 | 133 | - | - | |
| Arla11g00194 | 243 | ProSiteProfiles | SPX domain profile. | 1 | 144 | IPR004331 | - | |
| Arla11g00194 | 243 | PANTHER | SPX DOMAIN-CONTAINING PROTEIN 3 | 1 | 230 | IPR031142 | GO:0016036(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla11g00194 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Arla | Arla-Chr11:5688505 | Arla8g01586 | Arla-Chr8:84892384 | dispersed | |
| Arla | Arla-Chr11:5688505 | Arla6g00294 | Arla-Chr6:9272733 | transposed |