AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla11g00218 ATGCAGGCCAAAACATTCCATTTCATCCCATTGAAACCGTCGTCTCCGGCGATCAAACTGCCACCACCTCAGGCGATCTCGATCCCCGATCGAGTTCCTCGAAACATTTCCGTAACCGTACCAACACAAGAAGTTTCGACTTCAGTTCAAGATGAAAAAGCCGCAGCTTACTGGGATTACCAGTTTCTGTTCGTTTCCCAACGATCAGAAACTGCTAATCCCATCAGCTTACGCATTTCCCAAGGCTCCATCCCCCCAAATTTCCCGCTCGGCACGTATTATCTCACCGGTCCGGGCCTGTTCCGCGACGACCACGGCTCGACGGTGCACCCGCTCGACGGCCACGGCTACCTTCGGGCGTTCACGATTGACGGCTCGAAGGGCGAGGTCACGTTCATGGCTCGGTACATCGAGACCACGGCTCAAGCCGAGGAGCACGACCGTGAGACCGGAAAGTGGCGATTCACCCACCGTGGCCCGTTTTCGGTCCTGAAGAACGGGAAGAAGCTCGGGAACACGAAGGTGATGAAGAACGTGGCGAACACGAGCGTGTTGAAATGGGGGGACCGGTTGTTTTGCTTGTGGGAAGGCGGTGCACCGTACGAGATCGAATCGGGATCGTTGGATACGATCGGAAAGTTCGATTTGATCACAGGTGATGGTGGATCGTTGAGGTCCGACGACGGAGATGCGGTGGTGGAGGGTGGTGGGAGGCTGTTGGATCTTGCTGCAAGCATATTGAAGCCAATATTATATGGGGTTTTCAAGATGCCCTCAAAACGGCTGTTGTCGCATTATAAGATTGACGCTTCGAGGAATAGGCTTCTTATGATGTCATGCAATGCAGAAGATATGCTCCTCCCACGCAGTACTTTCACCTTCTATGAATTTGATTGCAATTTCAAGATGCTAAAGAAGCAAGAATTCGACATCCCAGAACACCTTATGATCCACGACTGGTCTTTCACAGATTCTCATTACATATTGTTTGGAAATAGGATCAAACTTGACATTCTTGGATCAATGGCAGCAGTATGTGGATTTACTCCAATGATTTCAGCATTATCAGTAAACCCTAGCAAATCCACATCTCCAATATATATGCTTCCTCGTTTTCATGATCATCAAGGAGTAGGCAGAGATTGGAAAATCCCCATTGAAGCTCCGTCGCAAATGTGGGTTCTTCACGTCGGGAATGCATTCGAACAGAAAGATGGTGACGGAAATACGCACATTCAGATACAAGCGAGCGGTTGTTCGTATAAATGGTTCAATTTTCAGAAAATGTTCGGATACGATTGGCAAAGTGGCAAGTTGGATCCATCGATGATGAACGCAGACGGAGAAAACAAGTTGTTGCCTCATCTAATCCAGGTTTCGATTGACTTGGATGCAAGCGGAAATTGCGAAAAATGTTGTGTGAATCCTCTAAACGATCAATGGGAAAAAGCGACTGATTTCCCGGTTATCAATCAAGATTTCGGTGGAAGCAACAACAAGTACGTGTATGCAGCAACATCTTCAGGTGTTCGCCGCGAACTGCCGCATTTTCCATTCGATACGGTGGTGAAGTTCGACACGGTGACGAATTCGACCCAAACGTGGTCGGTGAGCGCCCGACGGTTCATCGGTGAGCCCATTTTCGTCTCGAATGGAAGCGAAGAAGATGATGGATACCTTCTTGTAGTAGAGTATGCAGTGTCAAAACAACAATGTTATCTAGTGATTTTGGATGCCAAGAAGATTGGGGAGACAAATGCAATTGTGGCAAGACTTGAAGTGCCTAAACACTTGAATTTTCCTTTAGGATTTCATGGTTTTTGGGCTCCTACATAA 1836 47.93 MQAKTFHFIPLKPSSPAIKLPPPQAISIPDRVPRNISVTVPTQEVSTSVQDEKAAAYWDYQFLFVSQRSETANPISLRISQGSIPPNFPLGTYYLTGPGLFRDDHGSTVHPLDGHGYLRAFTIDGSKGEVTFMARYIETTAQAEEHDRETGKWRFTHRGPFSVLKNGKKLGNTKVMKNVANTSVLKWGDRLFCLWEGGAPYEIESGSLDTIGKFDLITGDGGSLRSDDGDAVVEGGGRLLDLAASILKPILYGVFKMPSKRLLSHYKIDASRNRLLMMSCNAEDMLLPRSTFTFYEFDCNFKMLKKQEFDIPEHLMIHDWSFTDSHYILFGNRIKLDILGSMAAVCGFTPMISALSVNPSKSTSPIYMLPRFHDHQGVGRDWKIPIEAPSQMWVLHVGNAFEQKDGDGNTHIQIQASGCSYKWFNFQKMFGYDWQSGKLDPSMMNADGENKLLPHLIQVSIDLDASGNCEKCCVNPLNDQWEKATDFPVINQDFGGSNNKYVYAATSSGVRRELPHFPFDTVVKFDTVTNSTQTWSVSARRFIGEPIFVSNGSEEDDGYLLVVEYAVSKQQCYLVILDAKKIGETNAIVARLEVPKHLNFPLGFHGFWAPT 611
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla11g00218 611 Pfam Retinal pigment epithelial membrane protein 65 610 IPR004294 GO:0016702(InterPro)
Arla11g00218 611 PANTHER BETA-CAROTENE DIOXYGENASE 43 610 IPR004294 GO:0010436(PANTHER)|GO:0016121(PANTHER)|GO:0016702(InterPro)|GO:0045549(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla11g00218 K17912 9-cis-beta-carotene 9',10'-cleaving dioxygenase [EC:1.13.11.68]