AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla11g00245 ATGGCGGTGGCGACGACTTCCTCCGGCGACAACATCGCACCGGTCTCACAATCCATGGATAAATCACCTACAACAAACTCATCGGATGATACTACCGCCATCGAATTCGAACCTCCGTCGGTGGTAAATGGTTCCTCCTCCACCGCCACCGCTGCCGTAGATCCGGCTGATAACTCTACTCCCTCACCTAGAGCTTCACCTTCCAGACAACTGGAATATCAGCCGTCTTTGAGGAGTGAAGAATATCGACAACTGTTTCGTCTTCCTCCTGAAGAAGTACTTATTCAAGATTTCAATTGTGCATTGCAAGAGAATTTCATCCTTCAGGGTCATATGTACCTGTTTATTCGTCACATATGCTTTTATTCAAACCTATTTGGATTTGAGACAAAGAAAATAATTCCTTTTGATGAACTTACCTCGGTAAAAAGAGCAAAGACTGCAGGAATATTTCCTACTGCCATAGAATTAATAGCTTCAGAAAAAAAGTACTTTTTTACGTCGTTCTTATCGCGTGATGAAGCCTTTAAGCTTATTAACGATGGTTGGTTGGAACATGGGAATGGATGTAAAGCTATCTCTGACCAGCAGGACTCGAGGTCTGAGTTGATTGATGAAGAGCCTGAAATTGTTGTGGCTGAAGATTCAGATGAAGCCAGACCGCTAGGGGAAAATCTAGAAACCACAAACAGAAACACCAGTGACTCTATATCAGAAGATCCCAACTCTTCACTTGACATAGAAGCTGAAGTATCATTGACATCTTCCAGAGTGCAAGATGCTGTAGAGGATACCCTTGTTCAAAATACTGATTGTTCATCTTCTGGAAAATCTTTAGCATGGGATATTGAGGATGCTGATGCACCAGATGTCCCTGAGGGTTTTACACTGGCTGCAGAATCTCCATTTGCGATAAAAGTGGACGAGTTCTTTGGTTTCTTTTACTCAGATGATGCCCTCCCTTTTCTTGAATCATATCACAAAAAATGTGGAGATAAAGATCTTAAGTGTACATCATGGAAACCCCATGACCAATTTGGTTATGCTCGTGAAGTATCATTTCAACATCCAATCAAAATTTATTTTGGTGCAAGATTTGGTTCTTGCAACGAAGTACAGAACTTTCGAGTTTACAGAAACAGTCATTTGGTTCTGAAGACATCACAAGTGATCAATGATGTACCCTATGGAGACTACTTTTGCGTGGAGGGGCTATGGGATGTGGTAGCGGATTCAAATGATGGTTGCACATTAAGGGTATATGTCAATGTTGCATTCTCCAAGAGAACCATGTGGAAAGGGAAGATAGTGCAGGCTACAATTGAAGAGTGCCGAGATACTTTTGCAGCCTGGATAGAACTTGCGAATGCGTTTCTGAAACAGAAGAACGTTGACAGAGAAGCCAACTTGATCGCCAACATAAATGTAGAACCAGTACGAACCCTGGAAAATTTACACCCATCACGTCAGGAGACGGACATGCCAACCACACAGACTGTTCCACAGTCCCGGGAAGTGAACAACGTCAGCATCTCGTTGCAAGAATCTTCAAGTGGTTCTGGCACTGCTGCATCCTTTTTCAGAGATTCCATTCCAAAACTGTTTTCATCTTTCAAGTCTCAGAACCAGGTCCCTTCCTTTGTTGTTATCCTCTTGGCTGTGGTCATCCTTCTGATGCAGATAAGTATCGTTGTGCTGCTTCTCAGACCTCAAACCGTTCAAGTGGTTTCCGATACGGCCTGGATGAGCAACGCCCGCATCGATAGAAGGGCAGAGACGGTTTCATTACTAAACAAACAGATCGATCATCTCAAGGAAGAGATGCTTATCGTTGAGACCCTACTGGAAAAAATGCGACATGAGCATGATATGTTAACCGTTCAACTGAAAAACTTGATGCTTAGGAAAATGTAG 1914 42.95 MAVATTSSGDNIAPVSQSMDKSPTTNSSDDTTAIEFEPPSVVNGSSSTATAAVDPADNSTPSPRASPSRQLEYQPSLRSEEYRQLFRLPPEEVLIQDFNCALQENFILQGHMYLFIRHICFYSNLFGFETKKIIPFDELTSVKRAKTAGIFPTAIELIASEKKYFFTSFLSRDEAFKLINDGWLEHGNGCKAISDQQDSRSELIDEEPEIVVAEDSDEARPLGENLETTNRNTSDSISEDPNSSLDIEAEVSLTSSRVQDAVEDTLVQNTDCSSSGKSLAWDIEDADAPDVPEGFTLAAESPFAIKVDEFFGFFYSDDALPFLESYHKKCGDKDLKCTSWKPHDQFGYAREVSFQHPIKIYFGARFGSCNEVQNFRVYRNSHLVLKTSQVINDVPYGDYFCVEGLWDVVADSNDGCTLRVYVNVAFSKRTMWKGKIVQATIEECRDTFAAWIELANAFLKQKNVDREANLIANINVEPVRTLENLHPSRQETDMPTTQTVPQSREVNNVSISLQESSSGSGTAASFFRDSIPKLFSSFKSQNQVPSFVVILLAVVILLMQISIVVLLLRPQTVQVVSDTAWMSNARIDRRAETVSLLNKQIDHLKEEMLIVETLLEKMRHEHDMLTVQLKNLMLRKM 637
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla11g00245 637 ProSiteProfiles VASt domain profile. 294 463 IPR031968 -
Arla11g00245 637 MobiDBLite consensus disorder prediction 211 244 - -
Arla11g00245 637 Pfam GRAM domain 82 183 IPR004182 -
Arla11g00245 637 SMART gram2001c 80 146 IPR004182 -
Arla11g00245 637 Gene3D - 78 185 IPR011993 -
Arla11g00245 637 Pfam VAD1 Analog of StAR-related lipid transfer domain 299 443 IPR031968 -
Arla11g00245 637 CDD PH-GRAM-GRAMDC 90 183 - -
Arla11g00245 637 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 19 633 - GO:0043069(PANTHER)
Arla11g00245 637 MobiDBLite consensus disorder prediction 1 73 - -
Arla11g00245 637 MobiDBLite consensus disorder prediction 225 244 - -
Arla11g00245 637 Coils Coil 587 635 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla11g00245 K27900 vascular associated death 1, chloroplastic