Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla11g00245 | ATGGCGGTGGCGACGACTTCCTCCGGCGACAACATCGCACCGGTCTCACAATCCATGGATAAATCACCTACAACAAACTCATCGGATGATACTACCGCCATCGAATTCGAACCTCCGTCGGTGGTAAATGGTTCCTCCTCCACCGCCACCGCTGCCGTAGATCCGGCTGATAACTCTACTCCCTCACCTAGAGCTTCACCTTCCAGACAACTGGAATATCAGCCGTCTTTGAGGAGTGAAGAATATCGACAACTGTTTCGTCTTCCTCCTGAAGAAGTACTTATTCAAGATTTCAATTGTGCATTGCAAGAGAATTTCATCCTTCAGGGTCATATGTACCTGTTTATTCGTCACATATGCTTTTATTCAAACCTATTTGGATTTGAGACAAAGAAAATAATTCCTTTTGATGAACTTACCTCGGTAAAAAGAGCAAAGACTGCAGGAATATTTCCTACTGCCATAGAATTAATAGCTTCAGAAAAAAAGTACTTTTTTACGTCGTTCTTATCGCGTGATGAAGCCTTTAAGCTTATTAACGATGGTTGGTTGGAACATGGGAATGGATGTAAAGCTATCTCTGACCAGCAGGACTCGAGGTCTGAGTTGATTGATGAAGAGCCTGAAATTGTTGTGGCTGAAGATTCAGATGAAGCCAGACCGCTAGGGGAAAATCTAGAAACCACAAACAGAAACACCAGTGACTCTATATCAGAAGATCCCAACTCTTCACTTGACATAGAAGCTGAAGTATCATTGACATCTTCCAGAGTGCAAGATGCTGTAGAGGATACCCTTGTTCAAAATACTGATTGTTCATCTTCTGGAAAATCTTTAGCATGGGATATTGAGGATGCTGATGCACCAGATGTCCCTGAGGGTTTTACACTGGCTGCAGAATCTCCATTTGCGATAAAAGTGGACGAGTTCTTTGGTTTCTTTTACTCAGATGATGCCCTCCCTTTTCTTGAATCATATCACAAAAAATGTGGAGATAAAGATCTTAAGTGTACATCATGGAAACCCCATGACCAATTTGGTTATGCTCGTGAAGTATCATTTCAACATCCAATCAAAATTTATTTTGGTGCAAGATTTGGTTCTTGCAACGAAGTACAGAACTTTCGAGTTTACAGAAACAGTCATTTGGTTCTGAAGACATCACAAGTGATCAATGATGTACCCTATGGAGACTACTTTTGCGTGGAGGGGCTATGGGATGTGGTAGCGGATTCAAATGATGGTTGCACATTAAGGGTATATGTCAATGTTGCATTCTCCAAGAGAACCATGTGGAAAGGGAAGATAGTGCAGGCTACAATTGAAGAGTGCCGAGATACTTTTGCAGCCTGGATAGAACTTGCGAATGCGTTTCTGAAACAGAAGAACGTTGACAGAGAAGCCAACTTGATCGCCAACATAAATGTAGAACCAGTACGAACCCTGGAAAATTTACACCCATCACGTCAGGAGACGGACATGCCAACCACACAGACTGTTCCACAGTCCCGGGAAGTGAACAACGTCAGCATCTCGTTGCAAGAATCTTCAAGTGGTTCTGGCACTGCTGCATCCTTTTTCAGAGATTCCATTCCAAAACTGTTTTCATCTTTCAAGTCTCAGAACCAGGTCCCTTCCTTTGTTGTTATCCTCTTGGCTGTGGTCATCCTTCTGATGCAGATAAGTATCGTTGTGCTGCTTCTCAGACCTCAAACCGTTCAAGTGGTTTCCGATACGGCCTGGATGAGCAACGCCCGCATCGATAGAAGGGCAGAGACGGTTTCATTACTAAACAAACAGATCGATCATCTCAAGGAAGAGATGCTTATCGTTGAGACCCTACTGGAAAAAATGCGACATGAGCATGATATGTTAACCGTTCAACTGAAAAACTTGATGCTTAGGAAAATGTAG | 1914 | 42.95 | MAVATTSSGDNIAPVSQSMDKSPTTNSSDDTTAIEFEPPSVVNGSSSTATAAVDPADNSTPSPRASPSRQLEYQPSLRSEEYRQLFRLPPEEVLIQDFNCALQENFILQGHMYLFIRHICFYSNLFGFETKKIIPFDELTSVKRAKTAGIFPTAIELIASEKKYFFTSFLSRDEAFKLINDGWLEHGNGCKAISDQQDSRSELIDEEPEIVVAEDSDEARPLGENLETTNRNTSDSISEDPNSSLDIEAEVSLTSSRVQDAVEDTLVQNTDCSSSGKSLAWDIEDADAPDVPEGFTLAAESPFAIKVDEFFGFFYSDDALPFLESYHKKCGDKDLKCTSWKPHDQFGYAREVSFQHPIKIYFGARFGSCNEVQNFRVYRNSHLVLKTSQVINDVPYGDYFCVEGLWDVVADSNDGCTLRVYVNVAFSKRTMWKGKIVQATIEECRDTFAAWIELANAFLKQKNVDREANLIANINVEPVRTLENLHPSRQETDMPTTQTVPQSREVNNVSISLQESSSGSGTAASFFRDSIPKLFSSFKSQNQVPSFVVILLAVVILLMQISIVVLLLRPQTVQVVSDTAWMSNARIDRRAETVSLLNKQIDHLKEEMLIVETLLEKMRHEHDMLTVQLKNLMLRKM | 637 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla11g00245 | 637 | ProSiteProfiles | VASt domain profile. | 294 | 463 | IPR031968 | - | |
| Arla11g00245 | 637 | MobiDBLite | consensus disorder prediction | 211 | 244 | - | - | |
| Arla11g00245 | 637 | Pfam | GRAM domain | 82 | 183 | IPR004182 | - | |
| Arla11g00245 | 637 | SMART | gram2001c | 80 | 146 | IPR004182 | - | |
| Arla11g00245 | 637 | Gene3D | - | 78 | 185 | IPR011993 | - | |
| Arla11g00245 | 637 | Pfam | VAD1 Analog of StAR-related lipid transfer domain | 299 | 443 | IPR031968 | - | |
| Arla11g00245 | 637 | CDD | PH-GRAM-GRAMDC | 90 | 183 | - | - | |
| Arla11g00245 | 637 | PANTHER | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC | 19 | 633 | - | GO:0043069(PANTHER) | |
| Arla11g00245 | 637 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
| Arla11g00245 | 637 | MobiDBLite | consensus disorder prediction | 225 | 244 | - | - | |
| Arla11g00245 | 637 | Coils | Coil | 587 | 635 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla11g00245 | K27900 | vascular associated death 1, chloroplastic |