Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arla11g00258	ATGGCGACCGCGAACCCTTTTGATTTGCTCGGAGATGATGACAACGATGACCCATCACAGCTTGTGCAAAAGATCGTTGCTGCACCCATCAAGAAACTTCAACCCGCAGCTAAAACGGCCCCACAGCCGGCTAAGCCGTCGGCTAAGCTTCCCTCTAAGCCGCTTCCTCCAGCTCAAGCCGTGAAAGAAGCCAGAAACGAAGGTGGGCGTGGAGGACGTGGTGGTGGTGGTCGTGGGTATGGTCGTGGCCGTGGCGGAGGTGGGTTTAATAGAGATTCGGCTAACAACGAGGGTTCTTTCGGTAACCGTGGATTCTCTGGTGGTCAAGGCGGTATTGAAGAGTCCGATGTTGGTAAATCTTCCGAGAGACGTGGTGGTTATGGTGGTCCTCGTGGCGGGTTCCGCGGTGGGCGCCATGTTTCTTTCGGTAATGGAGAGGCGGAGGATGGAGAACATTCTCGTCGGCCTTACGAACGCCGCAGTGGGACGGGGCGTGGGAACGAGTTCAAACGTGACGGAGCCGGTCGTGGGAACTGGGGAACTCAGGCTGATGACATCAATCAGGAGATTGAGGAAAGGGTGATCGAAGGAGAAAAAACTGTGGCTTCTGATAAGCCGAGTGCTGAGGAGGAGGCGACCGATGGGAAGAAGGAAAATTCTGCAAATGAACGTGTGGAGGAGCCTGAGAATAAGGAGATGACACTTGAAGAGTATCAAAAAGTTCTGGAGGAGAAGAGGAAAGCTCTGGCGGCACTCAAGACTGAAGAAAGAAAGGTGGAAGTCGACAAGGAGCTTGCATCCATGCAGCAGCTCTCCAACAAGAAAAGCAGCGATGACATCTTCGTCAAATTGGGTTCTGATAAAGATAAGCGCAAAGAGATTGCTGAGAGAGAAGAGAGAGCTAAAAAGTCACTGAGCATCAACGAGTTCTTGAAACCTGCTGAGGGTGAACGGTATTACACCCCAGGTGGTCGTGGCCGTGGCCGTGGCCCTAGAGGAGGTGGAGGTGGAGGTGGTGGCCGTTTTAACCAAGGCGGCAGCGGTGGTGGTGGTGGTTCATCAAGCTATGCACCTGAAGCTCCCAAAATCGAAGATCCCAGCCACTTCCCTACTTTAGGTGGTAAGTGA	1128	53.37	MATANPFDLLGDDDNDDPSQLVQKIVAAPIKKLQPAAKTAPQPAKPSAKLPSKPLPPAQAVKEARNEGGRGGRGGGGRGYGRGRGGGGFNRDSANNEGSFGNRGFSGGQGGIEESDVGKSSERRGGYGGPRGGFRGGRHVSFGNGEAEDGEHSRRPYERRSGTGRGNEFKRDGAGRGNWGTQADDINQEIEERVIEGEKTVASDKPSAEEEATDGKKENSANERVEEPENKEMTLEEYQKVLEEKRKALAALKTEERKVEVDKELASMQQLSNKKSSDDIFVKLGSDKDKRKEIAEREERAKKSLSINEFLKPAEGERYYTPGGRGRGRGPRGGGGGGGGRFNQGGSGGGGGSSSYAPEAPKIEDPSHFPTLGGK	375

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	1	21	-	-
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	142	172	-	-
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	280	306	-	-
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	186	234	-	-
	Arla11g00258	375	Pfam	Hyaluronan - mRNA binding family	154	259	IPR006861	-
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	33	234	-	-
	Arla11g00258	375	PANTHER	HYALURONIC ACID-BINDING PROTEIN 4	1	373	IPR039764	GO:0003723(PANTHER)\|GO:0003723(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)
	Arla11g00258	375	Pfam	Stm1	1	75	IPR019084	-
	Arla11g00258	375	SMART	HABP4-PAI-RBP1-2	153	260	IPR006861	-
	Arla11g00258	375	Coils	Coil	235	262	-	-
	Arla11g00258	375	Gene3D	-	151	265	-	-
	Arla11g00258	375	MobiDBLite	consensus disorder prediction	268	375	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arla11g00258	K13199	plasminogen activator inhibitor 1 RNA-binding protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	13974	Arla11g00258	Arla13g00408

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Arla	Arla-Chr11:8724011	Arla13g00408	Arla-Chr13:37171953	dispersed
	Arla	Arla-Chr11:8724011	Arla9g01616	Arla-Chr9:58167848	transposed