Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla11g01288 | ATGGCTACCTCGCTCCGCCGTCTCAAGAGAGGCATCGCTGCAGTTACTCCTTTTAGCAAGCTTTTTGCTCCGATCAGCTCCGTCTCAGCTGCTCCTTGCGTCCCACGGTGGTTCATTACTAACTCCTCTCATGCGTTCTCTTATGATGATTTCAATCGAAGTGTTGATGATGCGGATCTCCGTCATGGTTCCACTGTTTCTCGCCGCCGTGACAACGATGTCTTCTCAGATCTGTTTGATCCAATCTCTCCAACGAGAAGCTTGAGCCAGATCCTTAACACGATGGACCAATTCACGGACAATCCATTCATGTCCGCATCTCGTGGAGTAGGATTCGGACCACAGAAGCCATGGGACGCAAACGAAAACAAAGAGACTCTCAGCCTACGGTACTCTTCGAGAATCGATCTGCCGTCGAATGTATACAAAGTGGAGGAGGTTAAGGCGGAGATGAAGAACGGTGTGCTGAAAATCACGGTTCCGAAGGTGAAAACGGAGGAAAGGAAAGATGCAAGGCAGATTCAGGTAGAGTGA | 534 | 49.63 | MATSLRRLKRGIAAVTPFSKLFAPISSVSAAPCVPRWFITNSSHAFSYDDFNRSVDDADLRHGSTVSRRRDNDVFSDLFDPISPTRSLSQILNTMDQFTDNPFMSASRGVGFGPQKPWDANENKETLSLRYSSRIDLPSNVYKVEEVKAEMKNGVLKITVPKVKTEERKDARQIQVE | 177 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla11g01288 | 177 | Pfam | Hsp20-alpha crystallin family | 124 | 176 | IPR002068 | - | |
| Arla11g01288 | 177 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 16 | 177 | IPR002068 | - | |
| Arla11g01288 | 177 | Gene3D | - | 113 | 177 | IPR008978 | - | |
| Arla11g01288 | 177 | SUPERFAMILY | HSP20-like chaperones | 125 | 169 | IPR008978 | - | |
| Arla11g01288 | 177 | CDD | ACD-sHsps-like | 124 | 162 | - | - | |
| Arla11g01288 | 177 | PANTHER | 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL | 130 | 176 | IPR044587 | GO:0009408(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla11g01288 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Arla | Arla-Chr11:74981253 | Arla11g01289 | Arla-Chr11:74985883 | tandem |