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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla11g01288 ATGGCTACCTCGCTCCGCCGTCTCAAGAGAGGCATCGCTGCAGTTACTCCTTTTAGCAAGCTTTTTGCTCCGATCAGCTCCGTCTCAGCTGCTCCTTGCGTCCCACGGTGGTTCATTACTAACTCCTCTCATGCGTTCTCTTATGATGATTTCAATCGAAGTGTTGATGATGCGGATCTCCGTCATGGTTCCACTGTTTCTCGCCGCCGTGACAACGATGTCTTCTCAGATCTGTTTGATCCAATCTCTCCAACGAGAAGCTTGAGCCAGATCCTTAACACGATGGACCAATTCACGGACAATCCATTCATGTCCGCATCTCGTGGAGTAGGATTCGGACCACAGAAGCCATGGGACGCAAACGAAAACAAAGAGACTCTCAGCCTACGGTACTCTTCGAGAATCGATCTGCCGTCGAATGTATACAAAGTGGAGGAGGTTAAGGCGGAGATGAAGAACGGTGTGCTGAAAATCACGGTTCCGAAGGTGAAAACGGAGGAAAGGAAAGATGCAAGGCAGATTCAGGTAGAGTGA 534 49.63 MATSLRRLKRGIAAVTPFSKLFAPISSVSAAPCVPRWFITNSSHAFSYDDFNRSVDDADLRHGSTVSRRRDNDVFSDLFDPISPTRSLSQILNTMDQFTDNPFMSASRGVGFGPQKPWDANENKETLSLRYSSRIDLPSNVYKVEEVKAEMKNGVLKITVPKVKTEERKDARQIQVE 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla11g01288 177 Pfam Hsp20-alpha crystallin family 124 176 IPR002068 -
Arla11g01288 177 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 16 177 IPR002068 -
Arla11g01288 177 Gene3D - 113 177 IPR008978 -
Arla11g01288 177 SUPERFAMILY HSP20-like chaperones 125 169 IPR008978 -
Arla11g01288 177 CDD ACD-sHsps-like 124 162 - -
Arla11g01288 177 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 130 176 IPR044587 GO:0009408(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla11g01288 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr11:74981253 Arla11g01289 Arla-Chr11:74985883 tandem