AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla1g00079 ATGGCTTTTACTGTAATCCCTAATCTCTCTCCTCCATCTTTTACTCGCCTCCATCTTCATCAATCCTCCTTACAACATAAATCTTCTTCTTCATCTCCTTCTGCTGCAATTCACCCTACGCACCATGCTCACCTACCTCTACAATCGTCCGTCGAATCGCCGCCGGTTCGTGTTCGTGTTTCTCCGCCGCGCGATCCTCGGCAGGATTTCTACGTTAATCTCGGTTTAGCTGTTCGTACTCTCCGCCATGATCTACCTCTACTCTTCTCTACGGATCTCAATTACGAAATTTACAGGGACGATATCACCTTCGTTGATCCCCTCAACAAATTCACCGGTATACACAACTACAAACTCATCTTCAGTGCATTACGTTTCCATGGTCGTATCCTATTCAAAGAAATCTCCTTGGAGATTTTTAGGGTTTGGCAGCCATCAGAGAACCTAATATTGATCCGTTGGAACCTCAAGGGCGTCCCTCGTGTCCCCTGGGAAGCCAAGGGCCAGTTCCAGGGCACTTCTCGTTACAAATTGGATCGAAATGGGAAAATTTACGAGCATAAAGTCGATAATTTGGCTTTCAATTTCCCACAACAGCTAAAACCTGCTATATCTGTCCTGGATTTGGTGTCTGCTTGTCCTGCAACCCCTAACCCTACATTCTCTTGGGGCATTGTGGATTCTACTACCTATTCATCTTCGTGGCTAGACTTCTACCGTGCCGTTAAGAACACGTTGGATCCTAGCCAAGATTCTTCAGGGTTGCAGGATTGCCAACTACTTGCTACTTGTTTATAG 798 45.99 MAFTVIPNLSPPSFTRLHLHQSSLQHKSSSSSPSAAIHPTHHAHLPLQSSVESPPVRVRVSPPRDPRQDFYVNLGLAVRTLRHDLPLLFSTDLNYEIYRDDITFVDPLNKFTGIHNYKLIFSALRFHGRILFKEISLEIFRVWQPSENLILIRWNLKGVPRVPWEAKGQFQGTSRYKLDRNGKIYEHKVDNLAFNFPQQLKPAISVLDLVSACPATPNPTFSWGIVDSTTYSSSWLDFYRAVKNTLDPSQDSSGLQDCQLLATCL 265
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla1g00079 265 PANTHER RIKEN CDNA 2310061I04 GENE 18 211 IPR018790 -
Arla1g00079 265 SUPERFAMILY NTF2-like 92 188 IPR032710 -
Arla1g00079 265 Pfam Uncharacterized conserved protein (DUF2358) 77 187 IPR018790 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla1g00079 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr11:1312714 Arla1g00079 Arla-Chr1:1381967 dispersed