AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla1g00087 | ATGGCATCCGCCTTTCTTTCAAGAACTCTTTTTGCAAATCGTGTTGTTTCATCTTTCGCCTTCAATCAAAAGCCCCAAAAATTGGCGTCCGTTTTCTTTAAGAAACCCCTTCATTCGTGGGCTTCCTCATCTCGTATGGCGTATATGAGTACTTCCTCGATTCGTAGTGACATGGCTTCAACCGGGGTTGGATCTACAGCTACTTTTTTAACGAAGTCCGTGTCGACTACCGAGCCTGTTGTTTCAGTTGACTGGCTCCATGCCAATCTCCGTGAGCCTGATATCAAGGTATTGGATGCATCCTGGTACATGCCTGATGAACAGAGAAATCCACTTCAAGAGTATCAGGTTGCCCACATTCCTGGTGCTCTTTTCTTTGATGTAGATGGGATATCAGACCGAACCACCAATCTGCCACACATGTTGCCATCCGAGGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGGTAAAGGGATCTTCAGTGCCGCTCGTGTCTGGTGGATGTTCCGAGTTTTTGGACATGATAGAGTATGGGTATTAGATGGAGGCCTCCCCAGATGGCGTGCTTCGGGATTTGATGTTGAATCTAGTGCTTCTGGTGATGCAATATTGAAGGCTAGTGCCGCAAGTGAGGCAATAGAAAAAGTATACCATGGGCAGGCGGTTGGTCCAGTTACATTTCTAACAAAATATCAGCCGCATCTTGTATGGACACTTGAACAGGTTAAAAAGAATACGGAGGAACAAACACATCAACATATAGATGCCCGGTCAAAGGCCAGGTTTGATGGTGTTGCAGCCGAGCCTCGAAAAGGAATAAGAAGTGGTCATGTTCCCGGGAGTAAGTGCATTCCTTTTCTTCAGGTAATCAAGTCTATCTTCATTAGTTGTGTACGATCCATCTAG | 942 | 45.22 | MASAFLSRTLFANRVVSSFAFNQKPQKLASVFFKKPLHSWASSSRMAYMSTSSIRSDMASTGVGSTATFLTKSVSTTEPVVSVDWLHANLREPDIKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASGDAILKASAASEAIEKVYHGQAVGPVTFLTKYQPHLVWTLEQVKKNTEEQTHQHIDARSKARFDGVAAEPRKGIRSGHVPGSKCIPFLQVIKSIFISCVRSI | 313 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla1g00087 | 313 | ProSitePatterns | Rhodanese signature 1. | 115 | 126 | IPR001307 | GO:0004792(InterPro) | |
| Arla1g00087 | 313 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 245 | 301 | IPR036873 | - | |
| Arla1g00087 | 313 | ProSiteProfiles | Rhodanese domain profile. | 259 | 298 | IPR001763 | - | |
| Arla1g00087 | 313 | CDD | TST-Repeat-1 | 80 | 203 | - | - | |
| Arla1g00087 | 313 | FunFam | Sulfurtransferase | 73 | 215 | - | - | |
| Arla1g00087 | 313 | Gene3D | - | 72 | 214 | IPR036873 | - | |
| Arla1g00087 | 313 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 78 | 209 | IPR036873 | - | |
| Arla1g00087 | 313 | ProSiteProfiles | Rhodanese domain profile. | 91 | 208 | IPR001763 | - | |
| Arla1g00087 | 313 | SMART | rhod-4 | 81 | 205 | IPR001763 | - | |
| Arla1g00087 | 313 | Gene3D | - | 244 | 305 | IPR036873 | - | |
| Arla1g00087 | 313 | PANTHER | THIOSULFATE SULFERTANSFERASE | 76 | 302 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Arla1g00087 | 313 | Pfam | Rhodanese-like domain | 82 | 201 | IPR001763 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla1g00087 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Arla1g00087 | . | 1 | 305 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 72.524 | 1.24e-165 | 464.0 | |
| Arla1g00949 | . | 12 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 64.735 | 0.0 | 784.0 | |
| Arla2g00169 | . | 73 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.807 | 1.84e-176 | 499.0 | |
| Arla2g00694 | . | 82 | 464 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 73.89 | 0.0 | 580.0 | |
| Arla2g01579 | . | 6 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 62.468 | 1.70e-168 | 474.0 | |
| Arla11g00040 | . | 1 | 369 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 58.245 | 6.56e-138 | 402.0 | |
| Arla11g00857 | . | 13 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 56.731 | 1.99e-39 | 127.0 | |
| Arla12g00316 | . | 53 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 74.583 | 3.74e-136 | 386.0 | |
| Arla12g00763 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.58e-08 | 49.3 | |
| Arla12g01104 | . | 343 | 529 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 33.854 | 2.58e-19 | 84.7 | |
| Arla15g00279 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 24.424 | 7.05e-11 | 62.0 | |
| Arla16g00407 | . | 1 | 191 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 61.14 | 3.46e-81 | 239.0 | |
| Arla16g00774 | . | 16 | 241 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 36.207 | 1.21e-26 | 107.0 | |
| Arla17g00078 | . | 31 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 61.404 | 7.32e-76 | 226.0 | |
| Arla18g00230 | . | 47 | 216 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 31.351 | 2.60e-13 | 69.7 | |
| Arla18g00354 | . | 45 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 62.044 | 1.76e-58 | 179.0 | |
| Arla3g01553 | . | 26 | 138 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 57.895 | 1.12e-43 | 140.0 | |
| Arla3g01554 | . | 24 | 147 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 50.4 | 2.57e-44 | 142.0 | |
| Arla4g00682 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 68.376 | 3.13e-109 | 311.0 | |
| Arla4g02346 | . | 149 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 31.22 | 1.07e-19 | 89.7 | |
| Arla9g00764 | . | 17 | 145 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 68.148 | 5.34e-66 | 196.0 | |
| Arla9g01866 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 66.827 | 7.78e-105 | 306.0 | |
| Arla10g00415 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 71.03 | 0.0 | 670.0 |