AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla1g00098 ATGATGTCGGAGCACAGCAGCACAATTAGTACGGCAAGCGCGCCGGATTTTAACCTACCGGACGAGATACTGTCGGTGATTCCGACGGATCCTTACGACCAGTTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTTGCATCACGCGTCTCTAAACTGGAGTCGGAGGCAGGGAGGTTGAGGCAGAAACTGAACGAGAAAGATCGTGTGATAATGGAACTCGAAGGAAAAGTCAACGAGCTTCAGCAAACATGTCATAATGTTCAATTGCGATTACAGATTACACTCGAAGATAATACGAAACTTGCGGAGGAGAGAGATTCGTTGGCTATGGCTACTAAGAAGCTAGGGCGCGATTTATCTAAGCTGGAGACGTTCAAGCGACAATTAATGCAGTCATTGAATGACAATGATTCAACTCAATCAACAACTGTAGATATAGGCACCTATGACCAATCTGCTCCCAGAGCTTATCCCGTTAAAGAAGAGGAGACAAATGGCTATAGAAGACACCACTCTTTTAGTGGCTCTATAGATGGTGGAAACATCCCTGATGACGCCTCAAAGCATACTGGTCAAAGGTTTTCTGTGACACCGTATATCAGTGCACGTGTAACTCCAACTGCAACTCCTAAGACGATCTCTGCAAGTGTATCTCCTAGAAGATATTCTGCTTCTGGTGCTACATCCCCAACAAAAAATCAATACGAGGGGCGTACTACACTGTCATCATGGTACTCATCAAGCCAACAATCTTCTGCTGCAAACTCTCCTCCTCGTGGTCCCCCAATACCAGGCCGTACCTCTAAGATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGGGTGGATTTGATGCTGATTCTAAAATTCACTGTCTCAAGGCAACATGCATCTTACACGAGCTACTTGTTGGAACCCCTCCCCCCCCAAAAAGTGACCATGTTGTTGATAACCATGAAGTTGAGAGTGAATTTCAATTACTAAGCAATCGTGAGCTTGATGCGTTTAACACTCCAATGTCTCAAGATCCATGA 1035 45.51 MMSEHSSTISTASAPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAGRLRQKLNEKDRVIMELEGKVNELQQTCHNVQLRLQITLEDNTKLAEERDSLAMATKKLGRDLSKLETFKRQLMQSLNDNDSTQSTTVDIGTYDQSAPRAYPVKEEETNGYRRHHSFSGSIDGGNIPDDASKHTGQRFSVTPYISARVTPTATPKTISASVSPRRYSASGATSPTKNQYEGRTTLSSWYSSSQQSSAANSPPRGPPIPGRTSKIDGKEVFRQARGGFDADSKIHCLKATCILHELLVGTPPPPKSDHVVDNHEVESEFQLLSNRELDAFNTPMSQDP 344
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla1g00098 344 Coils Coil 50 91 - -
Arla1g00098 344 PANTHER OS03G0659800 PROTEIN 11 281 - -
Arla1g00098 344 MobiDBLite consensus disorder prediction 162 192 - -
Arla1g00098 344 MobiDBLite consensus disorder prediction 208 273 - -
Arla1g00098 344 MobiDBLite consensus disorder prediction 208 257 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla1g00098 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr1:1844012 Arla9g01442 Arla-Chr9:44980714 dispersed
Arla Arla-Chr1:1844012 Arla11g00648 Arla-Chr11:50354228 transposed