AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla1g00397 | ATGGTGGCTCTTTCAAAACCTCCAATTGAACAGTTCTTTGTGAAACCCTCAAAACCAAACACTAATAACCCATTAATCATTCCATCAATTCCTCTCATTGACCTCTCGAAACCCGAATCAAAACACCAACTTGTTAAAGCGTGTCAAGATTTTGGATTCTTTAAGGTCGTTAATCATGGAGTTCCTAAAAAGTTCATCAATAAACTCGAGTCAGAAGCTGTCAAGTTCTTCTCTTGTCCTCTTTCTACCAAAGAAAAAGCCGGACCACCCGACCCGTTTGGGTATGGAAACAAGAGAATTGGTAGAAACGGGGATGTGGGTTGGGTCGAGTATCTTCTTCTCAACGCAAAACTCGAATCGGATTACCAGAGATATCTATCTGTGTTTGAAGAAAACCCGGAAATATTCCAGGGAGTTGTGAATGATTATGTGACAGCAGTAAAGAAGATGGCATGTGAAATCCTCGAGTTATTGGCGGATGAAATGAAACTGCAGCCAAGAAATGTGTTTAGTAAACTGTTGATGGATGAAGAAAGTGACTCTGTTTTCAGAGTAAATCACTACCCACCATGCCCAGAGTTTCAAGAAAATGAAAAAAATGGAAGGAAATTGGTGGGTTTTGGAGAACACACAGACCCACAAATCATATCTGTTTTAAGATCTAATAACACATCTGGGCTTGAAATCTCATTGAGAGATGGAAGTTGGATGTCTGTTCCTGCTGATTCTGAGTCTTTTTTCATCAATGTTGGTGACTCTTTACAGGTACATATATATAAGCATTTGAAAAATTATCATTTTGAGTCTTTATATGATATAAAAAATATTTTATAA | 834 | 37.77 | MVALSKPPIEQFFVKPSKPNTNNPLIIPSIPLIDLSKPESKHQLVKACQDFGFFKVVNHGVPKKFINKLESEAVKFFSCPLSTKEKAGPPDPFGYGNKRIGRNGDVGWVEYLLLNAKLESDYQRYLSVFEENPEIFQGVVNDYVTAVKKMACEILELLADEMKLQPRNVFSKLLMDEESDSVFRVNHYPPCPEFQENEKNGRKLVGFGEHTDPQIISVLRSNNTSGLEISLRDGSWMSVPADSESFFINVGDSLQVHIYKHLKNYHFESLYDIKNIL | 277 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla1g00397 | 277 | Pfam | 2OG-Fe(II) oxygenase superfamily | 180 | 256 | IPR044861 | - | |
| Arla1g00397 | 277 | SUPERFAMILY | Clavaminate synthase-like | 9 | 256 | - | - | |
| Arla1g00397 | 277 | PRINTS | Isopenicillin N synthase signature | 44 | 61 | - | - | |
| Arla1g00397 | 277 | PRINTS | Isopenicillin N synthase signature | 210 | 231 | - | - | |
| Arla1g00397 | 277 | PANTHER | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED | 27 | 256 | IPR050231 | GO:0009416(PANTHER)|GO:0016706(PANTHER)|GO:0045487(PANTHER)|GO:0052634(PANTHER) | |
| Arla1g00397 | 277 | Gene3D | - | 3 | 265 | IPR027443 | - | |
| Arla1g00397 | 277 | Pfam | non-haem dioxygenase in morphine synthesis N-terminal | 30 | 123 | IPR026992 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla1g00397 | K04125 | gibberellin 2beta-dioxygenase [EC:1.14.11.13] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Arla | Arla-Chr1:9127518 | Arla8g00350 | Arla-Chr8:7711206 | dispersed | |
| Arla | Arla-Chr1:9127518 | Arla6g01392 | Arla-Chr6:89522889 | wgd | |
| Arla | Arla-Chr1:9127518 | Arla8g00347 | Arla-Chr8:7503485 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Arla1g00397 | . | 53 | 288 | GA20OX gene family | AT5G51810 | 30.924 | 9.77e-29 | 110.0 | |
| Arla1g00821 | . | 34 | 357 | GA20OX gene family | AT1G60980 | 29.429 | 2.42e-37 | 137.0 | |
| Arla1g00822 | . | 62 | 286 | GA20OX gene family | AT4G25420 | 30.901 | 1.24e-28 | 110.0 | |
| Arla1g01633 | . | 62 | 363 | GA20OX gene family | AT5G51810 | 29.755 | 2.27e-25 | 103.0 | |
| Arla1g01635 | . | 62 | 363 | GA20OX gene family | AT5G51810 | 29.193 | 3.57e-25 | 102.0 | |
| Arla1g01832 | . | 56 | 357 | GA20OX gene family | AT1G60980 | 30.945 | 1.40e-44 | 155.0 | |
| Arla1g02772 | . | 32 | 123 | GA20OX gene family | AT4G25420 | 31.915 | 8.85e-12 | 58.5 | |
| Arla1g02774 | . | 199 | 266 | GA20OX gene family | AT4G25420 | 42.647 | 8.12e-11 | 56.6 | |
| Arla1g02777 | . | 61 | 370 | GA20OX gene family | AT4G25420 | 32.476 | 5.59e-44 | 153.0 | |
| Arla1g02778 | . | 40 | 343 | GA20OX gene family | AT4G25420 | 29.967 | 1.71e-43 | 152.0 | |
| Arla1g02780 | . | 262 | 372 | GA20OX gene family | AT5G07200 | 33.929 | 2.61e-16 | 71.2 | |
| Arla2g00067 | . | 40 | 364 | GA20OX gene family | AT4G25420 | 32.132 | 7.88e-58 | 189.0 | |
| Arla2g00525 | . | 24 | 375 | GA20OX gene family | AT4G25420 | 69.774 | 0.0 | 515.0 | |
| Arla2g00603 | . | 55 | 358 | GA20OX gene family | AT1G60980 | 33.654 | 5.15e-36 | 131.0 | |
| Arla2g00671 | . | 35 | 371 | GA20OX gene family | AT1G60980 | 28.863 | 9.79e-38 | 137.0 | |
| Arla2g00672 | . | 35 | 371 | GA20OX gene family | AT1G60980 | 28.863 | 9.79e-38 | 137.0 | |
| Arla2g00673 | . | 38 | 140 | GA20OX gene family | AT4G25420 | 29.808 | 8.98e-11 | 57.4 | |
| Arla2g00674 | . | 189 | 372 | GA20OX gene family | AT1G60980 | 31.746 | 5.83e-25 | 97.8 | |
| Arla2g00751 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 33.538 | 1.11e-57 | 189.0 | |
| Arla2g01562 | . | 16 | 379 | GA20OX gene family | AT5G07200 | 45.822 | 1.12e-117 | 349.0 | |
| Arla2g01675 | . | 63 | 205 | GA20OX gene family | AT1G44090 | 27.211 | 4.15e-11 | 58.9 | |
| Arla2g01676 | . | 255 | 355 | GA20OX gene family | AT1G44090 | 37.624 | 4.53e-16 | 71.2 | |
| Arla2g02129 | ACH | 61 | 368 | GA20OX gene family | AT4G25420 | 26.266 | 3.24e-18 | 82.4 | |
| Arla2g02130 | ACH | 56 | 335 | GA20OX gene family | AT5G07200 | 26.502 | 3.59e-21 | 90.9 | |
| Arla2g02131 | ACH | 61 | 354 | GA20OX gene family | AT4G25420 | 26.51 | 1.30e-22 | 95.1 | |
| Arla11g01235 | . | 32 | 154 | GA20OX gene family | AT4G25420 | 32.0 | 4.31e-11 | 58.5 | |
| Arla11g01236 | . | 206 | 345 | GA20OX gene family | AT1G44090 | 37.589 | 2.77e-29 | 108.0 | |
| Arla12g00142 | . | 36 | 357 | GA20OX gene family | AT5G51810 | 30.183 | 4.24e-48 | 165.0 | |
| Arla12g01056 | . | 36 | 117 | GA20OX gene family | AT5G51810 | 29.885 | 2.08e-07 | 47.0 | |
| Arla13g00204 | . | 16 | 375 | GA20OX gene family | AT4G25420 | 61.983 | 1.73e-164 | 463.0 | |
| Arla13g00379 | . | 60 | 357 | GA20OX gene family | AT4G25420 | 25.333 | 1.44e-24 | 100.0 | |
| Arla13g00609 | . | 63 | 360 | GA20OX gene family | AT5G51810 | 29.126 | 7.85e-33 | 123.0 | |
| Arla13g00665 | . | 37 | 335 | GA20OX gene family | AT5G07200 | 32.468 | 3.47e-45 | 157.0 | |
| Arla13g00666 | . | 33 | 356 | GA20OX gene family | AT1G60980 | 32.515 | 1.30e-48 | 167.0 | |
| Arla13g00891 | . | 24 | 328 | GA20OX gene family | AT5G07200 | 31.111 | 4.01e-39 | 140.0 | |
| Arla13g00965 | . | 75 | 372 | GA20OX gene family | AT5G07200 | 28.803 | 4.31e-39 | 140.0 | |
| Arla14g00158 | . | 32 | 343 | GA20OX gene family | AT4G25420 | 31.902 | 1.01e-50 | 171.0 | |
| Arla14g00335 | . | 54 | 357 | GA20OX gene family | AT4G25420 | 24.756 | 2.94e-24 | 99.8 | |
| Arla14g00336 | ACH | 54 | 361 | GA20OX gene family | AT4G25420 | 25.321 | 3.91e-22 | 96.7 | |
| Arla15g00794 | . | 89 | 352 | GA20OX gene family | AT1G44090 | 28.467 | 3.63e-28 | 111.0 | |
| Arla16g00045 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 34.593 | 3.99e-59 | 194.0 | |
| Arla16g00933 | . | 35 | 352 | GA20OX gene family | AT4G25420 | 30.769 | 4.29e-43 | 151.0 | |
| Arla16g00934 | . | 93 | 364 | GA20OX gene family | AT5G51810 | 33.942 | 1.40e-43 | 150.0 | |
| Arla16g01003 | . | 61 | 349 | GA20OX gene family | AT5G51810 | 30.897 | 1.49e-35 | 130.0 | |
| Arla18g00098 | . | 38 | 335 | GA20OX gene family | AT4G25420 | 32.667 | 5.51e-50 | 169.0 | |
| Arla18g00393 | . | 32 | 360 | GA20OX gene family | AT1G60980 | 33.138 | 4.25e-47 | 162.0 | |
| Arla18g00645 | . | 67 | 328 | GA20OX gene family | AT5G51810 | 30.435 | 4.49e-28 | 110.0 | |
| Arla3g01496 | ACH | 53 | 374 | GA20OX gene family | AT5G07200 | 29.012 | 6.24e-28 | 109.0 | |
| Arla3g03186 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 34.211 | 1.33e-57 | 191.0 | |
| Arla3g03203 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 33.918 | 1.38e-57 | 189.0 | |
| Arla3g03489 | . | 86 | 356 | GA20OX gene family | AT4G25420 | 33.333 | 5.08e-37 | 135.0 | |
| Arla4g00822 | . | 16 | 375 | GA20OX gene family | AT4G25420 | 67.68 | 0.0 | 509.0 | |
| Arla4g01006 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 32.845 | 4.43e-55 | 183.0 | |
| Arla4g01594 | . | 30 | 332 | GA20OX gene family | AT5G07200 | 35.197 | 5.85e-47 | 161.0 | |
| Arla4g01920 | . | 32 | 154 | GA20OX gene family | AT4G25420 | 33.835 | 1.27e-12 | 62.8 | |
| Arla5g00543 | . | 61 | 369 | GA20OX gene family | AT4G25420 | 24.762 | 3.10e-19 | 85.9 | |
| Arla5g00854 | . | 17 | 371 | GA20OX gene family | AT5G51810 | 62.81 | 2.21e-168 | 473.0 | |
| Arla5g01332 | . | 35 | 357 | GA20OX gene family | AT4G25420 | 31.385 | 1.26e-46 | 160.0 | |
| Arla5g01559 | . | 39 | 341 | GA20OX gene family | AT4G25420 | 31.392 | 1.27e-43 | 153.0 | |
| Arla6g00349 | . | 61 | 272 | GA20OX gene family | AT4G25420 | 29.956 | 1.62e-23 | 96.3 | |
| Arla6g00350 | . | 54 | 366 | GA20OX gene family | AT5G51810 | 30.38 | 5.94e-41 | 145.0 | |
| Arla6g00555 | . | 47 | 368 | GA20OX gene family | AT5G07200 | 28.963 | 3.54e-27 | 107.0 | |
| Arla6g01197 | . | 44 | 352 | GA20OX gene family | AT4G25420 | 34.985 | 8.39e-56 | 185.0 | |
| Arla6g01198 | . | 61 | 126 | GA20OX gene family | AT4G25420 | 42.647 | 1.04e-07 | 49.3 | |
| Arla6g01347 | . | 80 | 351 | GA20OX gene family | AT1G60980 | 28.014 | 8.35e-39 | 139.0 | |
| Arla6g01392 | . | 63 | 357 | GA20OX gene family | AT5G51810 | 30.519 | 4.74e-40 | 143.0 | |
| Arla6g01534 | . | 56 | 364 | GA20OX gene family | AT1G60980 | 30.449 | 4.23e-30 | 115.0 | |
| Arla6g01535 | ACH | 81 | 335 | GA20OX gene family | AT5G07200 | 29.688 | 6.05e-23 | 99.0 | |
| Arla6g01536 | ACH | 57 | 335 | GA20OX gene family | AT5G07200 | 28.723 | 1.39e-26 | 109.0 | |
| Arla6g01537 | ACH | 177 | 335 | GA20OX gene family | AT5G07200 | 33.54 | 4.55e-21 | 88.2 | |
| Arla6g01538 | ACH | 63 | 355 | GA20OX gene family | AT4G25420 | 25.249 | 2.85e-16 | 77.0 | |
| Arla6g01539 | ACH | 63 | 369 | GA20OX gene family | AT4G25420 | 23.323 | 8.54e-17 | 78.2 | |
| Arla6g01546 | . | 285 | 335 | GA20OX gene family | AT5G07200 | 46.154 | 4.36e-08 | 47.0 | |
| Arla6g01548 | . | 63 | 355 | GA20OX gene family | AT4G25420 | 25.249 | 1.52e-16 | 77.8 | |
| Arla6g01549 | . | 63 | 369 | GA20OX gene family | AT4G25420 | 23.323 | 8.54e-17 | 78.2 | |
| Arla7g00009 | . | 61 | 342 | GA20OX gene family | AT5G51810 | 29.932 | 3.09e-29 | 113.0 | |
| Arla8g00233 | . | 35 | 368 | GA20OX gene family | AT5G07200 | 32.378 | 2.62e-48 | 165.0 | |
| Arla8g00347 | . | 61 | 343 | GA20OX gene family | AT4G25420 | 31.119 | 9.19e-25 | 100.0 | |
| Arla8g00350 | . | 63 | 346 | GA20OX gene family | AT5G51810 | 31.65 | 1.03e-42 | 151.0 | |
| Arla8g01719 | . | 189 | 351 | GA20OX gene family | AT1G60980 | 34.911 | 1.49e-26 | 102.0 | |
| Arla9g01457 | . | 37 | 368 | GA20OX gene family | AT4G25420 | 30.882 | 4.30e-51 | 173.0 | |
| Arla9g01830 | . | 206 | 367 | GA20OX gene family | AT5G51810 | 37.143 | 9.09e-29 | 107.0 | |
| Arla9g01831 | . | 56 | 142 | GA20OX gene family | AT4G25420 | 35.632 | 1.90e-10 | 56.2 | |
| Arla10g00118 | . | 51 | 366 | GA20OX gene family | AT4G25420 | 30.793 | 1.04e-37 | 139.0 | |
| Arla10g00325 | . | 37 | 334 | GA20OX gene family | AT5G07200 | 35.738 | 1.15e-50 | 172.0 | |
| Arla10g00684 | . | 59 | 347 | GA20OX gene family | AT4G25420 | 28.966 | 2.31e-39 | 142.0 | |
| Arla10g01778 | . | 60 | 367 | GA20OX gene family | AT5G51810 | 33.758 | 4.29e-40 | 142.0 |