AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla1g00420 ATGGTGGAGGTGGATGGTAAAGAAGACGCGGGTAGTAATGGCGGTGATAAGGAGAGGAACAACAACAACAGGTGGAGGTGGTGGGGAGTTGTTGGAGCTGTGATCGCTGTTTTAGTTGCCATATTTATCAATCCTTGGTGGCATTCGCACACAATTTCCTTCCTTCATAAACCCTACCTCTGTTCTGAGGATACATGTAAATATACAGGTATTGTTGAGGACTGCTGTTGTGACTATGAAAGCGTTGACGATGTTAATGGAGCAGTTTTACATATCCTGTTGCAAGAGCTTGTTGCGACTCCTTTCTTCCGATATTTCAAGGTTAAGTTATGGTGTGATTGCCCATTCTGGCCTGATGATGGTATGTGCCGCCTTAGTGATTGTGGTGTATGTGAGTGTCCCGAACATGAATTCCCTGAATCCTTTAAGACGCCATCTCTGCATATTCTTCCAAAAGATGACCCTGTATGTCAAGAAGGAAAGCCGGAGGCTACTGTTGATCGTACCCTAGATGATAAGTCATTTAGAGGCTGGGTAGAAATAGATAATCCATGGACTCATGATGATGAAACTGACAATGGTGAAATGACGTACGTAAATCTGCAACTGAACCCCGAACGTCATACAGGTTACACAGGGCCATTGGCAAGAAGAATATGGGATGCTATATACTCAGAAAACTGCCCAAGATATGCATTTGGAGAGGTGTGCCCAGAGAAGAAAATCTTATACAAGTTAATATCTGGTCTGCACTCCTCAATTTCAATCCACATAGCTGCTGATTATCTCCTTGATGAGACTACCAATCAGTGGGGTCCAAATCTTGAATTGATGCATGATCGTGTCCTGGCACATCCTGATCGCGTGCAAAACTTGTACTTCACTTTCCTATTCGTTCTTAGAGCTGTAACAAAAGCAGCTGCTTACTTGGATCAGGCTGAGTATGACTCTGGTAACCATGCAGAGGATCTGAAAGCCCAATCCTTGATACGACAACTGGTTCACAATCCCAAATTGCAAGCTGCATGCGCTCTTCCATTTGATGAGGCTAAAATGTGGCAAGGCCAAGGTGGACCCATACTGAGACAACAAATCCAAAATCAATTTCGGAACATAAGTGCACTCGTGGACTGTGTAGGGTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAGGTTCTCGGCCTTGGAACTGCCTTAAAAATTCTGTTCGCTGTCGATGATCAAGGAAACCCAGACCCACACCTGCAGTTACAAAGAAATGAAGGGATTGCTTTGATTAATCTACTAAATCGGCTATCAGAATCTCTTATATATGTTACTAAAATGGGGTCTTCAGTGTCTTCTGCTAATGAACCGAGTGTAATTGACAGACTATGGGATCATTGA 1386 43.58 MVEVDGKEDAGSNGGDKERNNNNRWRWWGVVGAVIAVLVAIFINPWWHSHTISFLHKPYLCSEDTCKYTGIVEDCCCDYESVDDVNGAVLHILLQELVATPFFRYFKVKLWCDCPFWPDDGMCRLSDCGVCECPEHEFPESFKTPSLHILPKDDPVCQEGKPEATVDRTLDDKSFRGWVEIDNPWTHDDETDNGEMTYVNLQLNPERHTGYTGPLARRIWDAIYSENCPRYAFGEVCPEKKILYKLISGLHSSISIHIAADYLLDETTNQWGPNLELMHDRVLAHPDRVQNLYFTFLFVLRAVTKAAAYLDQAEYDSGNHAEDLKAQSLIRQLVHNPKLQAACALPFDEAKMWQGQGGPILRQQIQNQFRNISALVDCVGCEKCRLWGKLQVLGLGTALKILFAVDDQGNPDPHLQLQRNEGIALINLLNRLSESLIYVTKMGSSVSSANEPSVIDRLWDH 461
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla1g00420 461 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 91 437 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Arla1g00420 461 PIRSF ERO 31 457 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Arla1g00420 461 PANTHER ERO1-RELATED 29 445 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro)
Arla1g00420 461 SUPERFAMILY ERO1-like 77 445 IPR037192 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla1g00420 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
16100 Arla1g00420 Arla8g00363
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr1:82776388 Arla1g00420 Arla-Chr1:10562166 transposed
Arla Arla-Chr1:10562166 Arla8g00363 Arla-Chr8:8448662 wgd