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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla3g03324 ATGGCGGTTTTTGCCACTCTATGCTTCGCTCCTCCATTTACTTTCTCTGCAAACCAGACCCATAATAACTCTGCCATTCTCACTCACCATCGTATTCTTGGTCCAGGGTCGACAACAACAAGAACAAGAACAAAACGTCTTGCTTTGGGCCACGATTTTCTCGGTGACTTTGGTGCTAGAGACCCTTTTCCGGCGGAGATAGAGAGCAATTTCGGTGACAAAGTGGGTGTTTATGACACCGAACACAAGATTCTAATCCCCACGGTTGCTGCTATGTCTCTTGCTCAACAAGAATGCACTCCAATTTCCCATCTGCGGTTTCCTATGGCCGAGGAGGATGCTCAGAAGCTTTTGAGAAAGGTTATTGGGTGGAGACTAGTAAACGAAGACGGAAAACTAAAGCTACAGTGCTTGTGGAAGCTTAGAGATTTTGAATGTGGAGTAGAACTCATAAACAGAATCTTCAAAGCTGTAGGATCTACAGGCCATTTTCCTAACCTTCATCTGGAACAATCCAATCAAGTTAGAGCTGAGCTCTGGACTTCTTCCATCGGAGGCTTGAGCATGAACGATTTCATTGTAGCTGCAAAAATTGACGATATCAGAACTTCAGACCTTGTTCCCAGGAAAAGAGCTTGGGCATAA 645 44.81 MAVFATLCFAPPFTFSANQTHNNSAILTHHRILGPGSTTTRTRTKRLALGHDFLGDFGARDPFPAEIESNFGDKVGVYDTEHKILIPTVAAMSLAQQECTPISHLRFPMAEEDAQKLLRKVIGWRLVNEDGKLKLQCLWKLRDFECGVELINRIFKAVGSTGHFPNLHLEQSNQVRAELWTSSIGGLSMNDFIVAAKIDDIRTSDLVPRKRAWA 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla3g03324 214 SUPERFAMILY PCD-like 108 201 IPR036428 GO:0006729(InterPro)|GO:0008124(InterPro)
Arla3g03324 214 Pfam Pterin 4 alpha carbinolamine dehydratase 108 201 IPR001533 GO:0006729(InterPro)|GO:0008124(InterPro)
Arla3g03324 214 Gene3D Transcriptional coactivator-pterin dehydratase 108 205 IPR036428 GO:0006729(InterPro)|GO:0008124(InterPro)
Arla3g03324 214 PANTHER PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE 66 204 IPR001533 GO:0006729(InterPro)|GO:0008124(InterPro)|GO:0008124(PANTHER)|GO:0009536(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla3g03324 K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr10:33709071 Arla3g03324 Arla-Chr3:134179630 dispersed