AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla4g01954 ATGGACTTCTGGGTGGTTGCAGCCGCTACCGGTGCCGGTTATGTTGCCAAGCACTGGCAGAATTTATCGGGTGAGAAAGATGGCTCACCGAACCCGACACCTATGCCATCACCACGACTGCAACCGGACGCATGCCGAGTGTTCAGCAAAATCCCCAACTCGGTTTTCCCACAGCCAGTTTCTGGTCCAGCTCCGATCTTTATCGAGAAACAAGTTTTTCAAGATGATACCGATGAAATCAACGGAAAACACGACTACTTTGACACTTCAGGCCATCGTTTATATGAATACAGAACCAATAACACAAATGGAAAATCGTTCTCGAGTCTGAGACCCTTAGTGGTAACCAATAACGGCAGAGATTCTGGACGAAAACAAACGACACAACTTGATGATATGAAAGACCGTAAGATCGTGTTCATGAATGAAATTGGATCATCCGTGGAAGCATCATTCCTTGAACCAGATGGATCAACAAAGCTTCCAAGAAGACCAAAACAAATGTATGTCAAGAGATTTGAAACAGGCAACGATATCGTGCCCTTGTTCCTCGGGATCACAATCGGGATATTGTCGACTACTGTGAGTAATCAACATGAAGTCAAGCATCTAAACGAGTTGCTAGAAGAAGCTGAAAGTATGGTTCGAGATTTACACAACAAACTTGAAACGAAAGACGGGATTTCCACAAAGGAGCACGGCACTGAGGCAAATAAAACTGCAACCGATAGTCCAAAAGCCGACAACTTTGAGTTAACAAGCGACATCGAGGCAGAGCTTGAGGCCGAGCTTGTGAGATTAGAACAAAATATGACTAACGCTGTGGAGGTTGATTCAGACATTGAAGCAGACATGGCTAGAGGAGACTTTAACCTAGATGCAGTCACCTGGCAACTTGATAGCCGATTTGAATTGGACAACAGTGACAAAAGTGAAAGCACCGGCAGACCCGATTTCACTCCAAACTACGCAGTTTCACCACTGGACTTACGGCTACGCCTTCATGAAGTAATCGAGTCAGAACTCCGAGCCCGTATCGAGGAGCTCGAGGCCATTCTCGAGAACCAAAACAGCCAACGTAAGCCTCCTTCACCAGACCCACAAGAAGAAAACTCTTTCTGGGACTTCGATCACACCAGAATCGAATCTTCTTCATCAACCCCTTAA 1167 45.76 MDFWVVAAATGAGYVAKHWQNLSGEKDGSPNPTPMPSPRLQPDACRVFSKIPNSVFPQPVSGPAPIFIEKQVFQDDTDEINGKHDYFDTSGHRLYEYRTNNTNGKSFSSLRPLVVTNNGRDSGRKQTTQLDDMKDRKIVFMNEIGSSVEASFLEPDGSTKLPRRPKQMYVKRFETGNDIVPLFLGITIGILSTTVSNQHEVKHLNELLEEAESMVRDLHNKLETKDGISTKEHGTEANKTATDSPKADNFELTSDIEAELEAELVRLEQNMTNAVEVDSDIEADMARGDFNLDAVTWQLDSRFELDNSDKSESTGRPDFTPNYAVSPLDLRLRLHEVIESELRARIEELEAILENQNSQRKPPSPDPQEENSFWDFDHTRIESSSSTP 388
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla4g01954 388 MobiDBLite consensus disorder prediction 224 239 - -
Arla4g01954 388 Coils Coil 250 277 - -
Arla4g01954 388 PANTHER EMB|CAB62613.1 1 358 IPR040348 GO:0008356(InterPro)
Arla4g01954 388 MobiDBLite consensus disorder prediction 354 388 - -
Arla4g01954 388 MobiDBLite consensus disorder prediction 224 247 - -
Arla4g01954 388 Coils Coil 201 224 - -
Arla4g01954 388 Coils Coil 339 359 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla4g01954 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr2:128185982 Arla4g01954 Arla-Chr4:105321853 dispersed