AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla4g01976 ATGTCGGTAACAACCATTACAGCATCCACAAACAGTAGTATAGGTGGCTCTGCCAATGCTTCAAGGAGGCATTTGAGACTAAAGAGAAGCCACCTAATTTTTGGGACTGAAAAAAGATTTTTTTTGCACCAATGTGTACAAAATGTTCCGTTTATGAGCCCCTCAGATATCTCTAGACAACGACATACAAGGGTTGAAGCAGGTTGGCTTTTTAAAGGAGGAGGTAACCAGGGTTCAGATGCGAGTTCAGAGCGTAGTGACAGCGCGAACGAGGATATACTTATATTCTTTTATCAGTTGGATTTGGCAACTAGAGTACAGTATGCATTAAATTTGGAGGAGTATGATATTGCAAAACAATTGAGAAACAAGCTTAATGAGGTTGAAACTGAAGTTATCAAGCAGCAAGAAACAAAGAGGGGATCGTCTTCAAAAAGTGAAGCTCAAGACAAGGGTATAAGCATCTTGCGATTGCGAGCAGACCTGCAGAACGCAATCGAAAATGAAAACTATTCTCTGGCAGCTGAAATACGTGATCAAATTTCCAAGGTGGAGGCGGATTCATTGGCTGCATCCATAAAAGCCCAAGCTTTCCAAAAAGCTCAATTCGAGTTTCGATTAGGCCAGAAAGTGAGGCACAAAAAGTTCGGATATAGAGCCGTGGTTTGTGGAATGGATCCAGTTTGCTGTGAAACAAGCTCATGGATGGAAAGTGCACATGTTGACCAGTTAACTCGTGGTCCTGATCAACCGTATTATCAGGTCTTGGTTGATGTACATGAAGACCCCAATCTATTGGTAGCATATGTTCCGGAGGAAAATTTACTGGCCCCCGAAGAACCGGATAAGGCTAGGTTTGATCATCCATACACTTCCTTCTTATTCTACGGTGTGGATTCAGCTGGAGACTTCATTCCCGTGAAGCAGCTGCGCGAGAAGTACAATAGACCTAGACACGAGGTGCCGTATGATCCACAAGATGAGAGGAGTGGAGGTGATGCTTGA 1005 43.38 MSVTTITASTNSSIGGSANASRRHLRLKRSHLIFGTEKRFFLHQCVQNVPFMSPSDISRQRHTRVEAGWLFKGGGNQGSDASSERSDSANEDILIFFYQLDLATRVQYALNLEEYDIAKQLRNKLNEVETEVIKQQETKRGSSSKSEAQDKGISILRLRADLQNAIENENYSLAAEIRDQISKVEADSLAASIKAQAFQKAQFEFRLGQKVRHKKFGYRAVVCGMDPVCCETSSWMESAHVDQLTRGPDQPYYQVLVDVHEDPNLLVAYVPEENLLAPEEPDKARFDHPYTSFLFYGVDSAGDFIPVKQLREKYNRPRHEVPYDPQDERSGGDA 334
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla4g01976 334 Pfam Hemimethylated DNA-binding protein YccV like 204 300 IPR011722 GO:0003677(InterPro)
Arla4g01976 334 MobiDBLite consensus disorder prediction 315 334 - -
Arla4g01976 334 Gene3D - 201 303 IPR036623 GO:0003677(InterPro)
Arla4g01976 334 PANTHER YCCV-LIKE DOMAIN-CONTAINING PROTEIN 63 329 IPR053189 -
Arla4g01976 334 SUPERFAMILY YccV-like 203 299 IPR036623 GO:0003677(InterPro)
Arla4g01976 334 MobiDBLite consensus disorder prediction 1 20 - -
Arla4g01976 334 NCBIfam heat shock protein HspQ 203 304 IPR011722 GO:0003677(InterPro)
Arla4g01976 334 Pfam UvrB-uvrC motif 155 186 IPR001943 GO:0005515(InterPro)
Arla4g01976 334 Coils Coil 118 138 - -
Arla4g01976 334 SMART YccV-like-2-a 202 306 IPR011722 GO:0003677(InterPro)
Arla4g01976 334 MobiDBLite consensus disorder prediction 1 19 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla4g01976 - -