AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla4g01979 ATGGGAACACAAGTACAGTCGAAAAGCTCTTTTGAAGGGTATTACTCCATGAGGGATGTTAACGAGGATTCCAATAGTAGCAGCTGGCCTCTCTTTTACGGGGAAAAACCTTTGACTAATGGTCATTATTACAACGGTTTCATACCAAGGTCGACCATTGCAGATGCACATCCGGGGTATGACAAGGATGCATTAAAGCAAAAAATGCTTGAACATGAAGACATCTTCAAAAAACAGGTGTCCGAACTTCATCGTCTTTATAAAAGACAAAGAGATATGATGGAAGACGTCAAAAGGAAGGAGTTCCATAAGCATCGGGTTTCAAATGATGCGTCATCGTCTTCAAGTCTCTTACCGTCTCAAAAGCCCTACGACAAATGGCAAGTACCGAGCTTCCCATTGGCCAACTCCACTTGTGCTAGACCCTCCATTTTCGGAGCAGAAATAAGCAACAATTCTCCTTTAAGTTGTTCAAAAGGGAATAACAGTTCAAAAGATTGTGAAGTCGTCGAGTGTAGACCTTCGAAAGTCAGAAAGAAGTTATTTGATCTTGAACTCCCCCCTGATGAGAACATTGACCATGAAGAAAACGAGCAAATCCAATATAAACAGGCGTCTGAAGAATCGAGTTATAAAGGTACTTCGTCTGGTCAATGTTTTAGGGGATCTAATGGATTGGCTGATCTTAACGAACCCATCCATGTTGAAGAAACGATCGGTCAAGCGTCGGTTGATGGTCTTAAACCAACGGTATCGCAGTTTCTTGGCTCGACCCATGAGTTCTTTGAGAAGTCTCAAAGTGGACGTCCTAGTGGGGCGTTCAACCCTTTAGCGCTCGAGGGAAAAGGCAATGGAAGAGATTGGTTGTCCAATACGCGTGAAACAGGGAATAGTAGAAGCAATACGAACTTCACACCAGGAACTTATTCCGAAATTTCTACAAGAATTCAAGATCATTCCCGTTTTAATCAAACCCCTTTGCCTTTTGCCACCTCACGTACATCTGGTTCATACCCTTTCGTGAATTCCTCAGATTTGGGAAATTCTTGGGGAAAGCCGAATGGTAGTTTGACTCATAAGTTGACTTCGTTTCAGAAACAACCGTCTTTTCTATCATCTCCGCAAAGCCATGTGGTTTTTGGAGACAAGTGGCGTACGAATGGATGTTATTCACCAAATGGAATCTATCGAGGGTCGTCATCTGGGTCGAAAGAACCATTAGCCCGCTTGCCTTCTGGCGGTTTTGATAATCGAAACTGCAATAATAATCTTGAAGATAGATCGCAAAAGATCTTCAAAGGTTCGAACTTTATAGATTTGACGGATACTACAAAAGGTATGGACCTGAATACGGTTGAAACCGTGTCTAATGACGACAACATTGCAAGAAAAGGAAATCAAACGGTGATGCCGTGGCTTCGAGCCACGCCAGCTATCTGTAAAAATGATTCCCCTTGTGATCAGTCGAAAAATGGGGAGAAAGGTGACGATTCTTTGGCTAATAACGGAAAGATTCTCGGGTTTCCGGTTTTTGGGAATTCTTGTGTTTCGAAAAACGATTCTTCGTCGCTTGTTTCCACCTCTGCATCCCTTCATTGCCCTCGTGAAAACGGAAAAATAAAGAAGGAAATAATGGAACACAGAGGATTCGACATAAATGTCGCTTGGGATGATCCTGAAAACAAGCAGATTGATCCGGAAGCTTCTAATCTCGAGAAAGAAACCGATACAGAAATCGAGAAAATCAAGAATCATTTTGACTTGAATTCGTGCGTGACCGAGGACGAAGATTTTCTAGTACCGGAGTCTGTTAAAAGCTCGAGTGAGAAAACAAAGAAGATAACAATGGAGATAGATTTAGAAGCTCCCGCTGTTCCGGAGGTCGAGGAAGAAACCGCCATCGATGAGGTCGAGAAACTTGATGTTTGCGAAGATGAAGAGCTCGCAAAAGTTGCAGCCGAAGCGATAATTGAAATATCCGGTCAGCAAGATCAAGCGGGACCCAAGTCTGAGGTGGCAATTCATTCAGACGACAACGAGCGCCTCCTATGGTTTGCGGAAGTCATCGGAAATGCGGGTCCCGTCTCTAACGAGTTGGATGAATTCGAGGAGTTGACTTTGCAAGTAGAGGAGACTAAAGAAGAAGATTACATGCCCAAGCCTTTGGCTCCTGATTTCCGGGAGCCCGACGAAGCGGGCCTGTCGACGGTCCCGACCCGACCCCGTAGAGGTCAAGCGCGGCGAGGTAGGCCCCGGAGGGATTTCCAAAGGGACATCCTTCCGGGTCTGGTTTCTCTTTCGAGGCATGAAGTAACCGAAGATCTTCAGATATTCGGAGGGATGATGAGAGCTACGGGGCATTCGTGGAATGTAGGACTGACAAGAAGGAACGGGACCAGGGGAAGGCGGAAGGCCGTGGCAGTGGCGGTGGAGCCACCACCTGCCGCGACTCCACCACCACCACCACCTCCTCCTCCATCACCGCCGCCGCCGCCGCCACCCTTGTCGGAGCAGCTTAACAACATGGAAATGGTGGGATTGGAGGAAAGAAGCTTAACGGGGTGGGGGAAGACAACGAGACGTCCCCGGAGACAACGATGTGCCGCGGGTAGTTCGGTGGCGGTCCCGTTAACGTAA 2637 46.57 MGTQVQSKSSFEGYYSMRDVNEDSNSSSWPLFYGEKPLTNGHYYNGFIPRSTIADAHPGYDKDALKQKMLEHEDIFKKQVSELHRLYKRQRDMMEDVKRKEFHKHRVSNDASSSSSLLPSQKPYDKWQVPSFPLANSTCARPSIFGAEISNNSPLSCSKGNNSSKDCEVVECRPSKVRKKLFDLELPPDENIDHEENEQIQYKQASEESSYKGTSSGQCFRGSNGLADLNEPIHVEETIGQASVDGLKPTVSQFLGSTHEFFEKSQSGRPSGAFNPLALEGKGNGRDWLSNTRETGNSRSNTNFTPGTYSEISTRIQDHSRFNQTPLPFATSRTSGSYPFVNSSDLGNSWGKPNGSLTHKLTSFQKQPSFLSSPQSHVVFGDKWRTNGCYSPNGIYRGSSSGSKEPLARLPSGGFDNRNCNNNLEDRSQKIFKGSNFIDLTDTTKGMDLNTVETVSNDDNIARKGNQTVMPWLRATPAICKNDSPCDQSKNGEKGDDSLANNGKILGFPVFGNSCVSKNDSSSLVSTSASLHCPRENGKIKKEIMEHRGFDINVAWDDPENKQIDPEASNLEKETDTEIEKIKNHFDLNSCVTEDEDFLVPESVKSSSEKTKKITMEIDLEAPAVPEVEEETAIDEVEKLDVCEDEELAKVAAEAIIEISGQQDQAGPKSEVAIHSDDNERLLWFAEVIGNAGPVSNELDEFEELTLQVEETKEEDYMPKPLAPDFREPDEAGLSTVPTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDLQIFGGMMRATGHSWNVGLTRRNGTRGRRKAVAVAVEPPPAATPPPPPPPPPSPPPPPPPLSEQLNNMEMVGLEERSLTGWGKTTRRPRRQRCAAGSSVAVPLT 878
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla4g01979 878 MobiDBLite consensus disorder prediction 713 754 - -
Arla4g01979 878 MobiDBLite consensus disorder prediction 263 308 - -
Arla4g01979 878 MobiDBLite consensus disorder prediction 101 122 - -
Arla4g01979 878 MobiDBLite consensus disorder prediction 713 727 - -
Arla4g01979 878 Pfam Plant protein of unknown function (DUF863) 696 867 IPR008581 -
Arla4g01979 878 Pfam Plant protein of unknown function (DUF863) 311 486 IPR008581 -
Arla4g01979 878 Pfam Plant protein of unknown function (DUF863) 500 689 IPR008581 -
Arla4g01979 878 Pfam Plant protein of unknown function (DUF863) 139 212 IPR008581 -
Arla4g01979 878 Pfam Plant protein of unknown function (DUF863) 213 311 IPR008581 -
Arla4g01979 878 MobiDBLite consensus disorder prediction 288 308 - -
Arla4g01979 878 MobiDBLite consensus disorder prediction 812 837 - -
Arla4g01979 878 MobiDBLite consensus disorder prediction 810 878 - -
Arla4g01979 878 Coils Coil 695 715 - -
Arla4g01979 878 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 867 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla4g01979 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
17479 Arla4g01979 Arla7g01433
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr14:64639659 Arla4g01979 Arla-Chr4:105774309 dispersed
Arla Arla-Chr3:104041393 Arla4g01979 Arla-Chr4:105774309 dispersed
Arla Arla-Chr4:105774309 Arla7g01433 Arla-Chr7:45673693 wgd