Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla7g00034 | ATGGGAACGAGAACGAACTTCTACAAGAACCCTTCTTTTACATACAACAAAGATTTCGATCTCAACTCTGTTCTGCAAAACCTAAAGGCTTATAATGCTGCCACCGGAAACCCCACTCCACCGGAGGAAGAACCAGTCCCCGGTAACGAAAAATTCGGCTTACAATCCAACCGCCGCAAGCGACGGAGGATTTCGTCGCCTCCGGAGAAAAGACATAAAATTGAAGAAAGTGATGGGCCCATGTCTCACCATGATTATATTCAGAAAATGAGGAAGGAAGCTAATTCAACTCAAGCCTTTGAAGAATTAAATAATAATGTGTTGGAGGGTTCAGCCTCTGGTGTAGGATTAGTGGGGTATGATAGTGATAATAGTACCTCCTCCCAAGGTGAAGAGAATCAGGAGCCTCACATATCTGGTTTGATCCCGGATATCAGTGAAGAGAAGGATCCTCATATTGCTGGAAATATAAACACTGCCAATCATGTAAAAGAAAGAAGTGAGCAGCGGTTTCCTGTTCCTGGAGAGCCTGCATGTGTGATCTGTGGCAAATATGGGGAATATATATGCGACGAGACTGATGATGATATCTGCAGCATCGACTGCAAAGCTGAGCTACTGGAGAATCTCAAGAGTTCTCAGAGGCCTCCAAGCAACCAACGTTTAGTTGAGGTGTCATCTGGACCTAAATTCCCGTTACAAATTGTTGAAAGTGGAGGAGACACTTGGGATTTCAACCGTCATCGCTGGTCAACAAAGAGATCTAGCCTATGTACTTATGAATGTTGGAAATGCAAGAAGGCTGGTCATCTTGCTGAAGATTGTTTAGTCATAACGTCAATCCCTCAATCTTTCTCCTCTGGCCTCCAGGCCTCATCATCTACAAAGAGATCAAGTGTTATACCCAAGGATCTTCTTGAACTATACAAAAGATGCCACCAAATCAGCAAGAAGTCCACAGCAGCCAAGTGCAACGCCTGCCATAGGTTATCTACTTTGGCCATGTGCCTTGATTGTGGCATGACATTTTGTGATAGTGCAGGACACTTGGTTGAGCATATCCAAACACACCCTTCCCACAGAAAGTTCTATTCTTATAAGCTTAATCGTCTTGTTAAGTGCTGTAAATCAAGTTGCAAGGTGACTGATATCAAGGATCTTCTTGCTTGTCACTTCTGCTTTGATAAAGCCTTTGACAAGTTTTATGACATGTGCAGCGCAACCTGGAAAGCAGCTGGACTTTCAATCATTGCTAACTCCATTTGTTGTGAAGATCACTTTGCTTGGCATAGAATGAATTGCTTGAATGCGGGCGTGGAAGATGGTGCATATATCTTCAAGAAGAAGATGCAGAATGAGAAGCGATCTCAGTTGAGCGATTTCATATTCTAA | 1392 | 43.25 | MGTRTNFYKNPSFTYNKDFDLNSVLQNLKAYNAATGNPTPPEEEPVPGNEKFGLQSNRRKRRRISSPPEKRHKIEESDGPMSHHDYIQKMRKEANSTQAFEELNNNVLEGSASGVGLVGYDSDNSTSSQGEENQEPHISGLIPDISEEKDPHIAGNINTANHVKERSEQRFPVPGEPACVICGKYGEYICDETDDDICSIDCKAELLENLKSSQRPPSNQRLVEVSSGPKFPLQIVESGGDTWDFNRHRWSTKRSSLCTYECWKCKKAGHLAEDCLVITSIPQSFSSGLQASSSTKRSSVIPKDLLELYKRCHQISKKSTAAKCNACHRLSTLAMCLDCGMTFCDSAGHLVEHIQTHPSHRKFYSYKLNRLVKCCKSSCKVTDIKDLLACHFCFDKAFDKFYDMCSATWKAAGLSIIANSICCEDHFAWHRMNCLNAGVEDGAYIFKKKMQNEKRSQLSDFIF | 463 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla7g00034 | 463 | Gene3D | - | 258 | 311 | - | - | |
| Arla7g00034 | 463 | Pfam | HIT zinc finger | 177 | 203 | IPR007529 | - | |
| Arla7g00034 | 463 | ProSiteProfiles | Zinc finger CCHC-type profile. | 262 | 275 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Arla7g00034 | 463 | SMART | c2hcfinal6 | 261 | 277 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Arla7g00034 | 463 | SUPERFAMILY | Retrovirus zinc finger-like domains | 248 | 275 | IPR036875 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Arla7g00034 | 463 | MobiDBLite | consensus disorder prediction | 68 | 83 | - | - | |
| Arla7g00034 | 463 | PANTHER | CCHC-TYPE DOMAIN-CONTAINING PROTEIN | 1 | 463 | - | - | |
| Arla7g00034 | 463 | MobiDBLite | consensus disorder prediction | 32 | 83 | - | - | |
| Arla7g00034 | 463 | Gene3D | - | 159 | 216 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla7g00034 | - | - |