AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla9g01075 ATGTCCACCGCCGTCGCCCGTGACGTTGCCGTCATCGGTGCCGGAGCAGCTGGGTTAGCAGCTGCCCGCCACCTCCGGCGAGAAGGTCACTCCGTCGTCGTCTTCGAGAGAGAATCCCTAGTCGGAGGCACTTGGATTTACACCAACAATACCGAACCCGATCCACTCGGCATTGATCCAACTCGACCTGTGGTCCACTCTAGTCTCTACGCCTCCCTCCGAACTAATTTACCACGAGAAGCAATGAGTTTCAGAGAGTACCCTTTTGTACCAAAGAAAACGGGTCACAGAGATCCGAGGAGGTTTCCGGGTCATAAGGAGGTCTTGGAGTATTTGAAGGATTACGCCACCGAGTTCGGAATCGGTGAGTTAGTTCGGTTTGAGACGGTGGTAAATCGGGTTTGGCGAGGGGAAAATGGCAAGTGGGAAGTGAGATCAAGAAAGAGAGGTGGAGAAGAAGAAGAGCATATGGATGAAGCTTTTGATGCTGTGGTTGTTTGTAATGGGCATTATTCCGAGCCCCGAATCGCACATATTCCAGGTGTGGATCGGTGGCCTGGAAAGCAAATTCATAGTCACAATTATCGAGTTCCAGAACCCTTTCAAAATCAGGTTGTTGTGCTAATAGGGAGTGCAGCAAGTGCTGTTGATATCTCTAGAGAAATTGCAAGTGTTGCTAATCAAGTCCATATTGCATCTCGATCGATCTCCGATGAAGAAGCTACAATGGTACCCGGATACGACAATATTTGGCTCCATCCTATGATTGAACGTGCACATGAAGATGGTACAATCTCATTTTCAAACGGGTTCAAAATCGTTGTTGACATTATTCTACATTGCACTGGGTACAAGTATCATTTTCCGTTTCTTGATACCAAAGGCATCGTGACCGTTGATGACAATCGAGTGGGGCCACTTTATAAGCACGTCTTCCCACCATCATTAGCCCCTTGGCTTTCTTTCGTTGGATTGCCATACAAGACCGCTCCATTTCCCCAGTTTGAAATCCAAAGCAAATGGATAGCAGGCATATTATCAGGTCGAATTTCACTGCCTTCACCCGAGGAGATGACAAAAGATATCGAAGCATTTTATTCATCGTTGCAAAAATGCGGTGTCCCAAAACGATATACCCATAATATGACTGGCTATCAGTTTGAGTACAACGACTGGATTGCGACAAAATGTGGGTGCCCACAAACCGAAGAATGGAGAAAGAAAATGTATTCCGCAACTTCTTTGAACAGAGAAGCACGACCCGAGACTTATCGGGATGAATGGGAAGATGAGGATTTGGTGTTGGAAGCTTATCAAGATTTCAAAAAGCAAATTTCTTGTCAAAATGTGACTTCGCAACTACAGAATTTCAACATGTGA 1380 46.09 MSTAVARDVAVIGAGAAGLAAARHLRREGHSVVVFERESLVGGTWIYTNNTEPDPLGIDPTRPVVHSSLYASLRTNLPREAMSFREYPFVPKKTGHRDPRRFPGHKEVLEYLKDYATEFGIGELVRFETVVNRVWRGENGKWEVRSRKRGGEEEEHMDEAFDAVVVCNGHYSEPRIAHIPGVDRWPGKQIHSHNYRVPEPFQNQVVVLIGSAASAVDISREIASVANQVHIASRSISDEEATMVPGYDNIWLHPMIERAHEDGTISFSNGFKIVVDIILHCTGYKYHFPFLDTKGIVTVDDNRVGPLYKHVFPPSLAPWLSFVGLPYKTAPFPQFEIQSKWIAGILSGRISLPSPEEMTKDIEAFYSSLQKCGVPKRYTHNMTGYQFEYNDWIATKCGCPQTEEWRKKMYSATSLNREARPETYRDEWEDEDLVLEAYQDFKKQISCQNVTSQLQNFNM 459
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla9g01075 459 Gene3D - 178 281 IPR036188 -
Arla9g01075 459 Pfam Flavin-binding monooxygenase-like 251 394 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 Pfam Flavin-binding monooxygenase-like 7 235 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PIRSF FMO 238 405 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PIRSF FMO 5 238 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 333 346 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 217 232 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 268 295 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 7 23 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 31 55 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 PRINTS Flavin-containing monooxygenase (FMO) signature 190 204 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Arla9g01075 459 Gene3D - 9 427 IPR036188 -
Arla9g01075 459 FunFam Flavin-containing monooxygenase 178 281 - -
Arla9g01075 459 SUPERFAMILY FAD-NAD(P)-binding domain 263 432 IPR036188 -
Arla9g01075 459 SUPERFAMILY FAD-NAD(P)-binding domain 7 251 IPR036188 -
Arla9g01075 459 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 432 IPR050346 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla9g01075 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr2:129414090 Arla9g01075 Arla-Chr9:26106406 dispersed
Arla Arla-Chr9:26106406 Arla9g01079 Arla-Chr9:26196695 dispersed
Arla Arla-Chr9:26106406 Arla9g01076 Arla-Chr9:26148264 tandem