Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arla9g01535	ATGGCGTGGTCGATTCGAGTATTTGGTCAAGGTTACAGAGTTTTGATGGCAGCCGCGAACAGCTCCACCACCGTCGCTGCCACCGCCACCGCACCCAAGCGGGGCCGCCCTGCCGGTATTCTAAAAGTGGTTCCTGTGTCCCAACCTCTGGGAGAGTTCCTCGGCGCCTCGGAAGCATCTCGAACCGATGCTGTGAAGAAAGTTTGGGAATACATCAAGCTCAATAATCTCCAGAACCCATTGAACAAGAAGGAGATCCTGTGTGATGCCAAATTGAAGACAATATTTAATGGGAAGCCGCAAGTTGGATTCCTGGAGATTGCCAAGTTGTTATCACAGCATTTTGTCAAGTCTAGCTGA	360	50.83	MAWSIRVFGQGYRVLMAAANSSTTVAATATAPKRGRPAGILKVVPVSQPLGEFLGASEASRTDAVKKVWEYIKLNNLQNPLNKKEILCDAKLKTIFNGKPQVGFLEIAKLLSQHFVKSS	119

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arla9g01535	119	PANTHER	SWI-SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	27	118	-	GO:0005634(PANTHER)
	Arla9g01535	119	Gene3D	SWIB-MDM2 domain	35	119	IPR036885	-
	Arla9g01535	119	CDD	SWIB-MDM2-like	44	115	-	-
	Arla9g01535	119	SMART	swib-2	40	119	IPR019835	-
	Arla9g01535	119	ProSiteProfiles	SWIB-MDM2 domain profile.	39	117	IPR003121	-
	Arla9g01535	119	Pfam	SWIB-MDM2 domain	43	115	IPR003121	-
	Arla9g01535	119	SUPERFAMILY	SWIB-MDM2 domain	34	117	IPR036885	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arla9g01535	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Arla	Arla-Chr10:55796613	Arla9g01535	Arla-Chr9:52143866	dispersed
	Arla	Arla-Chr18:53403602	Arla9g01535	Arla-Chr9:52143866	dispersed
	Arla	Arla-Chr1:31247581	Arla9g01535	Arla-Chr9:52143866	dispersed
	Arla	Arla-Chr6:84362171	Arla9g01535	Arla-Chr9:52143866	dispersed
	Arla	Arla-Chr8:2722515	Arla9g01535	Arla-Chr9:52143866	dispersed
	Arla	Arla-Chr9:52143866	Arla8g00662	Arla-Chr8:19759106	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Arla	SWIB	4.3e-30	No_clan		TR	SWI/SNF-BAF60b