AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla9g01537 ATGACCGTTTCCGAAGACGAAGACGAACATCTGGCTCACTTTTTAGAATCGGAGGTTCTTTCAGAGATCTCTGATCAGGAGGATGCAAGATCGGACAAAGAGGACGTGCGGCAGCCGAAGAGGCTTCGGGTGGAGCAAAATGTTGGCGTGAGTAACAGAGTAATAACTCCAAGGAGGATAGATGATGGTTTCTTTAGCAGGATTCCTCCCGAGCTCTTCCCTCACATCCTTAAGTTTCTCTCCTCTGAGGATCTTGTTGCATGCTCATTGGTTTGTAGATTCCTAAATTTTGCATCTTCTGATGAATCCTTGTGGCGTCGCCTGTACTGTATGCGGTGGGGTATCCTGCCACCAACAAAAAAGTTGCGTGATCGTGCATGGAAAAAGCTGTATATTCAGCGTGATGAAGAAGACATGGTTGAGTTTGTTAGGAATTGCCCCAATGAGTTCAAAGAGTACTACATCCAAATGCAAGTAGCAAAGAGAAGCCAAGCACCTCTTCCTTCTCAGTTGAAAGATGACTGGATGATTCTGGACAAGTCTGTTGCTGATCAAGTGTCCATATGGAAGAGCAACAAAGGACTGACTGATAAAGTGTTTTCTGATCATGCTTGTTCTGGGGAAACTTGTTCTTACTATCAAATTGGAGATGTTTTTGTTTGTGAGAATACTGGATACGTTCATGTGTGTGATGATACTTGCAAGGATGTTGTCCTTGATCCAGAAAATGAGCTCTTGGTGTGTACAATTTCGGGGCATTGTTTTGATCGTTTACTTTCCCCATCGGAAATTGGAGGAGACATGGAAGAACAGCAGCAAGGTGGTGCAACGGATGAAGCAGAGCCGTTCATGGGATCCGGCCGTTTTGCGCGGGCTTACCAGTTGGGCTATAACTGTGAAGATGAAAAAGAGCTTGAAGCCTGCCTCAGGTTCTGCTGA 939 45.26 MTVSEDEDEHLAHFLESEVLSEISDQEDARSDKEDVRQPKRLRVEQNVGVSNRVITPRRIDDGFFSRIPPELFPHILKFLSSEDLVACSLVCRFLNFASSDESLWRRLYCMRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRNCPNEFKEYYIQMQVAKRSQAPLPSQLKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVCDDTCKDVVLDPENELLVCTISGHCFDRLLSPSEIGGDMEEQQQGGATDEAEPFMGSGRFARAYQLGYNCEDEKELEACLRFC 312
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla9g01537 312 CDD F-box-AtSKIP31-like 65 110 - -
Arla9g01537 312 FunFam F-box family protein-like 53 139 - -
Arla9g01537 312 Pfam F-box-like 65 110 IPR001810 GO:0005515(InterPro)
Arla9g01537 312 SUPERFAMILY F-box domain 61 134 IPR036047 GO:0005515(InterPro)
Arla9g01537 312 Gene3D - 50 139 - -
Arla9g01537 312 PANTHER F-BOX ONLY PROTEIN 3 56 310 IPR052121 GO:0005737(PANTHER)
Arla9g01537 312 ProSiteProfiles F-box domain profile. 62 108 IPR001810 GO:0005515(InterPro)
Arla9g01537 312 SMART fbox-2 68 108 IPR001810 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla9g01537 - -