Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arla9g01575 | ATGGGTACAATGGAGCTTCTCAATGTCGAACCTTTAGAGCTCAAATTCCCATTTGAATTAAAGAAACAGATCTCTTGCTCGTTACAGTTATCGAATAAGACCGAGAACTATGTAGCTTTCAAGGTGAAGACGACGAATCCAAAGAAGTATTGCGTTCGTCCGAATACCGGAGTAGTTTTGCCTCGATCAACATGTGACGTAATAGTAACAATGCAAGCTCAGAAGGAAGCTCCTCCTGACATGCAATGTAAGGACAAGTTTTTGCTTCAGAGTGTAGCTGCAAGCCCAGGAACAGCCCCAAAGGACATTACCCCGGAAATGTTCAGTAAGAATTCAGGGAGTGTTGTGGAAGAGTGCAAATTGAAAGTGGTATATCTTCCCCCACCCCAACCACCTTCACCCGTTCTTGAGGAACCCGATGAAGGAATGTCACCAAAGGTGTCCTTCACGGAAAGCACAAACCTCAACTCATCTCAGTCATCTCAGTCATCTGAGGCTCCAAGACAATATGTAGATTCTCAGGATAAACTCTTAGACGCAAGATCTATCATTGCAAAGTTGGTTGAAGAGAAGAATGCTGCTATTCAACAAAGCAACAAACTTCAACAAGAAATGGTGAGATATCTTTTATCCCATATACATTCTTTCATGCTTTTAAGCCTTTCTTTTGCCAACAAATATCTTACTCCCAGACCCTACCTTCGGATGAAATATACTGACTCTGTTTTTTGTTCTTTGCTAACTAACATCGCTCCAAATAAATTATTATCAATTCCAAAGGGCAAAGATCATTGTTTTATCGTTGATTGCGCTGTGTGTGTTCTGCCTTCCTCCCTTTTCATATGTTTACTATGCACCCATTAG | 864 | 41.2 | MGTMELLNVEPLELKFPFELKKQISCSLQLSNKTENYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVAASPGTAPKDITPEMFSKNSGSVVEECKLKVVYLPPPQPPSPVLEEPDEGMSPKVSFTESTNLNSSQSSQSSEAPRQYVDSQDKLLDARSIIAKLVEEKNAAIQQSNKLQQEMVRYLLSHIHSFMLLSLSFANKYLTPRPYLRMKYTDSVFCSLLTNIAPNKLLSIPKGKDHCFIVDCAVCVLPSSLFICLLCTH | 287 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arla9g01575 | 287 | MobiDBLite | consensus disorder prediction | 130 | 171 | - | - | |
| Arla9g01575 | 287 | Pfam | MSP (Major sperm protein) domain | 7 | 111 | IPR000535 | - | |
| Arla9g01575 | 287 | Gene3D | Immunoglobulins | 2 | 129 | IPR013783 | - | |
| Arla9g01575 | 287 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 4 | 218 | IPR016763 | GO:0005789(InterPro)|GO:0005789(PANTHER)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Arla9g01575 | 287 | FunFam | Vesicle-associated protein 1-1 | 1 | 129 | - | - | |
| Arla9g01575 | 287 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 6 | 126 | IPR000535 | - | |
| Arla9g01575 | 287 | SUPERFAMILY | PapD-like | 5 | 139 | IPR008962 | - | |
| Arla9g01575 | 287 | Coils | Coil | 184 | 204 | - | - | |
| Arla9g01575 | 287 | MobiDBLite | consensus disorder prediction | 146 | 170 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arla9g01575 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 14024 | Arla11g00829 | Arla9g01575 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Arla | Arla-Chr13:23500086 | Arla9g01575 | Arla-Chr9:55051528 | dispersed | |
| Arla | Arla-Chr3:84617185 | Arla9g01575 | Arla-Chr9:55051528 | dispersed | |
| Arla | Arla-Chr7:15836649 | Arla9g01575 | Arla-Chr9:55051528 | transposed | |
| Arla | Arla-Chr11:5613384 | Arla9g01575 | Arla-Chr9:55051528 | wgd |