AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00005 ATGGCGGCGGATCAGTTGAATAAGCGTCATAAAGTAAGCAATAGCATCCGTCATACTTCTTGGGGGCTGCAGAAAGCGAAAAAGAAGAAATCTTCTCATTATGATTTAAGCACGAGATCAAGTATTTCTCTCCAGTGGGATGATAAGAAGGAACATGTTGTTCCTAAGAAGGAGCAGATAAGTATTGCACGCAGAGAGTTGACTCCGTTTCTTCCTCTTGTTTCACATTGCCAGAATGTCCTGGGTGATGTCTTTGCAGCTCCTCCTGAATTATTTGAACTAGATAACTTGACGGGTTTGCTATCTTATGAGGTTTGGCAAACTCATTTGTCTGTACAAGAAAGAGAGTTTCTGATTCAGTTGCTTCCTGAAGGGGCTGACCCGCATGAAGTTGTTCATGAATTGTTAGCTGGGAATAATTTGTACTTCGGAAATCCATTCCCAAAATGGGGTGCTTCAATTTGTTCAGGTGATTGTCATCCTGATGCTGTTCTCCGTCAAGAACAGTGTAACAAGGCTAACAAAACAGCATATTATTCGGAATTGCATAAGTACCATACTAAAATGATTGGCAGTCTGCAGTTGTGGAAGGAAAGATGGGCAAGCTGCATGAATTCAGAAAATGATTTTATGCAAAAGATACTGAGGCCCAGAAAGGATTTTCACAAAAGTGGTTGCTCACATGAAAATGACATACTATATGGTCCTGAGGACAGTCAGGGTGCAACATCTGATTCTTGTTCCTGGGATGCTGATGATAAATCATGTAGTAGTGAGAGCCCAGATTTAACAATGAATGGAGAAACTATAATGAGGGTCTCCAGAATGGATATGGAGAACAAATGTTATGACTCTTCAAGTGGATGGAGATCGGTAGCAAGACAGAGAAAAGGAAACAGATTACACAGGCTTAATGTAGAGTGTGGTGATGGTGCCAAATATATGTCATACATCAAGGTCAGCAAGGAGCAGCATCAAAGAGTTAAGAGCAGTATGAAACACTCTAACACTAGCATTCAGCCGAGGTCTCTTAATAATGTATTGGGCAATCTTGATAGTTTCTGTGTTCAACCATATGAAATGTTTGAGGAAGAGGAAAGACAGAAGCTGCGGGAGCACTGGTTGCATTTGGCAAAGAAAGATCTCTCTGCAGGCTTTGAGAATTGGAAAAGTTGGCGATCTGCCAAGTGGCAATTGACAAAGTCTTTGAGGAAAGAAATGGAAGATAAATGGAAGTCGAATGATCAGTCGGTTTTGAATTTGTATAATCAAGACGAAGAGAATGAAGAAAGTCGTATCTTGACACTTAATAGCACTTACAATGCAACTTCAGATGACGGGATTGTGGATGCAACAAAGGATGAGGAGAAAGAGCAATTGCTTGGTAATCTGCATCATGAACAACAGGCTGATGGAGAAAAAGATGACGAACTTTCAACCCCACCTGAGGATAATGAGGAACAAAATGCTGATTCCATATTTCAGTCAGTGGCAGATCTTAATGCAACAAATCATGTAAAAGCAATGCAGATTGAACATACAAACGAATCTAGTCAAGACTCTGCTCAGAATCAGCATCTGCCACAGATTGGTATACAGGATGGTGGCGAAAACTTCTGCCCCATGGCCATCGACGCCAATAATGATGTTTTCACGGAATCAGATGCTTTCCCTTGTAATCTAGGTGAATATACTGAAAATATGAACCATGGAGATGCTCCTGTTGGTGAACAATTTCCTCTTCCCTCTGCTGCTGCCAGTGAAATATGGCCAGCAGTTAGCCTACAAAGTATGTACTATCATCAACCTACATCTGTAAGCCATGGATATGCTTCTATTAATGCGTTGTCACTTGGGCATCCCCAAGTTAGGCGAGACCCATCAAGCCAGGCGATAGTCCTAGAATCTGAGATGCAGCAAAAGGATACTCTTAGAAGTTTTCTGCAGAGGCGATCTGATGGTGTTGATTCTTTCTTTTATCCATATGCTAATCAAGAGCGTAACGAATTACTACTGCATTCACTTTTCAAGGATCCAGGGAACTCCCCTTATCTTCATGAGCAGAAGCTGTCTAGGCTAGGAGGTTTCCACCCAGCAGGCAGTGAGGCAATGCCTGGCAGTGGTCAATTTCCCAGGAACTTGTGCTCATCATCATTGCCGTTGGATCTGAGGCAGAAAAGGCTGGGTGACGTCACTATGCATCAGAACATTCAAGAAAACATATTTTCAGATGGAGGGGGCCGTTTCTCGATTCCAAGGCAAGAACACTTGTTGCCACTCAATCATGTTCAGGATTGGCCTGGGAATGGTGGTGTTAACATGCCAATGCTAGCGTCATCCCATCACCGGTTAAACAGCAGTGGAGAGGTGCCAAGTCAAAATTGGTTTTCTGATGATGAGATGGTGTGTGATGGGTGGTCAGTACCAAACCAGGAGACAGGGAATGGTAGTCAGATAGCAGATGAGAGCTTATTTAGCATTTTATCTCAGTGTAACAACGGGATGCGTTCAGGTGAGTTTATTCAGCCTGGGAACTATGTTGGGGTGGAGCGTGGAGCAGTTCCTCCTACAGCAAGCGATCCTCGAGCAGGTCTTAACTACATGAGTGGCAACGGAGGTCAATCTGCTGGTGCTGGTGCTGGGGCAAGAGGAGGCAACAGTTTGGGATGGATAAACGTGCCACGTACATTGCAGGAGAGTGGGGGGAAATCATGGAATGATAAGGGGTTAGGATGA 2736 43.42 MAADQLNKRHKVSNSIRHTSWGLQKAKKKKSSHYDLSTRSSISLQWDDKKEHVVPKKEQISIARRELTPFLPLVSHCQNVLGDVFAAPPELFELDNLTGLLSYEVWQTHLSVQEREFLIQLLPEGADPHEVVHELLAGNNLYFGNPFPKWGASICSGDCHPDAVLRQEQCNKANKTAYYSELHKYHTKMIGSLQLWKERWASCMNSENDFMQKILRPRKDFHKSGCSHENDILYGPEDSQGATSDSCSWDADDKSCSSESPDLTMNGETIMRVSRMDMENKCYDSSSGWRSVARQRKGNRLHRLNVECGDGAKYMSYIKVSKEQHQRVKSSMKHSNTSIQPRSLNNVLGNLDSFCVQPYEMFEEEERQKLREHWLHLAKKDLSAGFENWKSWRSAKWQLTKSLRKEMEDKWKSNDQSVLNLYNQDEENEESRILTLNSTYNATSDDGIVDATKDEEKEQLLGNLHHEQQADGEKDDELSTPPEDNEEQNADSIFQSVADLNATNHVKAMQIEHTNESSQDSAQNQHLPQIGIQDGGENFCPMAIDANNDVFTESDAFPCNLGEYTENMNHGDAPVGEQFPLPSAAASEIWPAVSLQSMYYHQPTSVSHGYASINALSLGHPQVRRDPSSQAIVLESEMQQKDTLRSFLQRRSDGVDSFFYPYANQERNELLLHSLFKDPGNSPYLHEQKLSRLGGFHPAGSEAMPGSGQFPRNLCSSSLPLDLRQKRLGDVTMHQNIQENIFSDGGGRFSIPRQEHLLPLNHVQDWPGNGGVNMPMLASSHHRLNSSGEVPSQNWFSDDEMVCDGWSVPNQETGNGSQIADESLFSILSQCNNGMRSGEFIQPGNYVGVERGAVPPTASDPRAGLNYMSGNGGQSAGAGAGARGGNSLGWINVPRTLQESGGKSWNDKGLG 911
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00005 911 PANTHER NFRKB-RELATED 1 906 IPR024867 GO:0031011(InterPro)
Armi18g00005 911 MobiDBLite consensus disorder prediction 237 263 - -
Armi18g00005 911 MobiDBLite consensus disorder prediction 463 487 - -
Armi18g00005 911 CDD DEUBAD-NFRKB 90 196 - -
Armi18g00005 911 MobiDBLite consensus disorder prediction 234 263 - -
Armi18g00005 911 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 88 199 IPR044867 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00005 - -