AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00009 ATGGAGGACAGCTTTAATGTTCGAGTTGATAGAGCTTTCGGATCTCTCGAAGCTGCTGCTTCAATCAAATCAACATCATCATCATCATCATCATCATCATCGTCTCTGTGGTGCCTCACCGACCAAGAGATTGAAAGAAACGAATGGATTCAACATAAAGTCACTTCTTACAAAGACAAAGATGAACATGTCCACAAAAATCCCAAACCTTATTCTTCTTTTCTCCAAGGCCTTCTTGCCCAACCCTCAACTTCTCATCAAGACCTGGAATCTGACCTTGAAGAGCTTGATGACGATCAGGAGCCACTGTCGTCTAAGCCAGACGATCACAGCAATGAGGAATGGAACATTCGATCTTCCGTAGGCATGGACTGCACTCTCGACAACGAGGAAGAGGAAGATGTTTTTGACAAGGTGGCTTTAGGCAAGGAAGAACGTTTTTACATGAGAGACGTTAATGTTAATGATTATGAAGTTGAAATAGATTCTAACAACGAGCTTCCCAACTCAATTACTGATGTGATGAGGGATCCCCGTGCAAATCGCATGGCAGCAAAAATCAGGCTTAAAGAAGATGATGAATCAGTTAGAAAGAAGATGAATGAAAGTGAAAAGGTTATCAGGCAGAGTGGAGATGTAGTGATGATGGATGAATTATTATTATTGCCTAGTGTTCCAGATTATGTACGCAATCCTTCAAAGTATACACATTATACCTTTGATTCGATGGATGATGTGGATGAAGAATCTAATAGAAAAGCTTATATGGAGTTGTTTAACTCGGTCAAGGGGTTGAGTGGTAGGGATGATGTTTCCACTAATTCTCCAACATCAGTTGTTTTCACTCCAAGAAACAAGTCAAGTGATGATGGTTCGATAAACAAAAATAAGGTAAATATGCAGAAGAAGAAGAAAGTGATTCCCATTGTTAGAATTGCTGCTGAGGCTGAGGCTGAGGTTTGTGTAATGGAGGAAGATGAGCCTGAAGTAGCAAGCAGTAAAAGTAAAGGTGGGCGCAGATATCGAACAAAGGGCAGTGGTGATGTGGAATAG 1053 40.93 MEDSFNVRVDRAFGSLEAAASIKSTSSSSSSSSSSLWCLTDQEIERNEWIQHKVTSYKDKDEHVHKNPKPYSSFLQGLLAQPSTSHQDLESDLEELDDDQEPLSSKPDDHSNEEWNIRSSVGMDCTLDNEEEEDVFDKVALGKEERFYMRDVNVNDYEVEIDSNNELPNSITDVMRDPRANRMAAKIRLKEDDESVRKKMNESEKVIRQSGDVVMMDELLLLPSVPDYVRNPSKYTHYTFDSMDDVDEESNRKAYMELFNSVKGLSGRDDVSTNSPTSVVFTPRNKSSDDGSINKNKVNMQKKKKVIPIVRIAAEAEAEVCVMEEDEPEVASSKSKGGRRYRTKGSGDVE 350
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00009 350 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 202 IPR029338 -
Armi18g00009 350 MobiDBLite consensus disorder prediction 327 350 - -
Armi18g00009 350 MobiDBLite consensus disorder prediction 324 350 - -
Armi18g00009 350 MobiDBLite consensus disorder prediction 56 117 - -
Armi18g00009 350 MobiDBLite consensus disorder prediction 265 295 - -
Armi18g00009 350 MobiDBLite consensus disorder prediction 266 295 - -
Armi18g00009 350 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 186 261 IPR029338 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00009 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr18:263552 Armi3g00016 Armi-Chr3:394703 dispersed