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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00011 ATGGAGACGGATGGGTCGTCGATGACAGATGAGATAGAGTACGTGAGTTATGGTGGAGAGCATCACTTGCCCCTTATCATGCGCCTCGTTGATGAAGAACTCAGCGAACCCTACTCCATCTTTACCTATCGTTACTTTGTCTATCTCTGGCCCAATCTCTCCTTCCTTGCTTTTCACAACGGAAAATGCATCGGAACCGTCGTTTCTAAGATGGGTGAGCACCGTAACACTTTCAGAGGCTACATTGCTATGCTCGTCGTCCTCAAACCTTACCGTCACAAGGGCATTGCTACAGAACTTGTTACCAGATCCATTAAAGTGATGATGGAATCAGGTTGTGAAGAGGTAACATTAGAAGCAGAAGTTACAAATAAGGGAGCGCTTGCATTATATGGCCGCCTTGGGTTTATAAGAGCAAAACGGCTATTTAGATACTACTTGAATGGTGTCGATGCTTTTCGACTGAAGCTTCTATTTCCCCATCCAGAATTACCACCCTCTCACTCGGTGATGTCATCAGTCCTTGAGAGTTATGGAGCAAATGAAATGGTTCCTCTGAAGAAAGATTGGTCCCTGAGTGAAGTTTAG 588 45.07 METDGSSMTDEIEYVSYGGEHHLPLIMRLVDEELSEPYSIFTYRYFVYLWPNLSFLAFHNGKCIGTVVSKMGEHRNTFRGYIAMLVVLKPYRHKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHPELPPSHSVMSSVLESYGANEMVPLKKDWSLSEV 195
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00011 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 160 IPR000182 GO:0016747(InterPro)
Armi18g00011 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 162 IPR016181 -
Armi18g00011 195 CDD NAT-SF 54 119 - -
Armi18g00011 195 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 9 163 IPR044542 GO:0004596(InterPro)|GO:0004596(PANTHER)|GO:0017196(PANTHER)|GO:0017196(InterPro)|GO:0031417(PANTHER)
Armi18g00011 195 FunFam N-alpha-acetyltransferase MAK3 isoform A 19 171 - -
Armi18g00011 195 Pfam Acetyltransferase (GNAT) family 26 136 IPR000182 GO:0016747(InterPro)
Armi18g00011 195 Gene3D - 19 172 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00011 K00670 N-alpha-acetyltransferase 30 [EC:2.3.1.256]
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Armi Acetyltransf_1 1.4e-20 CL0257 TR GNAT