AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00014 ATGAACCCACAACCTCCTTCTTCTTCCTCCTCCAATCAGCCACCCAATTATTCGGAAACTCACGTCATGGGTACACCTATGCCGCCCTCCAACCCCTACGTCCAATATACACCTCCACCTCCACCTCCCAACAACCACAACCTCGATAATGTCCGTAAGAAGCTCAATACCTGGGGCAACAAGGCAGAGACCACCGCCACCAACATATGGACCAATCTGAAAACGGGTCAATCTGTGACCGGATCGGCATGGGGGAAAATGAATTTGACGGCAAAAGCATTAACGGAAGGTGGATTCGAATCCCTATACAGGCAAAACTTCACGGTTTACCCCAACGAGAAGCTGAGCAGGACTTTTGCCTGTTACTTGTCTACATCCACCGGACCTGTCGCCGGAACCCTCTATCTATCCAATATTCATGTGGCTTTTTGTAGCGATCGGCCTTTGTCTTCCATTCAACCCAACGGCATGGAGTCTTGGGTCTATTACAAGCTCATCATCCCATTACAGAAGATAGCCACGGTGAATCCGGTTACGGTGACAGGTAAAAAACAAGTAGACAAATACATCCAGATCTCAACGGTTGATGCTCAAGATTTCTGGTTCATGGGTTTTGTGAATCACGAGAAAGCATCAAAACATCTCCTCAATGGTGTCTCCACTGCCCCACGCTTTCCTTAA 681 48.16 MNPQPPSSSSSNQPPNYSETHVMGTPMPPSNPYVQYTPPPPPPNNHNLDNVRKKLNTWGNKAETTATNIWTNLKTGQSVTGSAWGKMNLTAKALTEGGFESLYRQNFTVYPNEKLSRTFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLSSIQPNGMESWVYYKLIIPLQKIATVNPVTVTGKKQVDKYIQISTVDAQDFWFMGFVNHEKASKHLLNGVSTAPRFP 226
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00014 226 MobiDBLite consensus disorder prediction 1 51 - -
Armi18g00014 226 MobiDBLite consensus disorder prediction 31 46 - -
Armi18g00014 226 PANTHER GEM-LIKE PROTEIN 2 18 220 IPR037848 -
Armi18g00014 226 SMART gram2001c 101 179 IPR004182 -
Armi18g00014 226 Gene3D - 99 220 IPR011993 -
Armi18g00014 226 Pfam GRAM domain 103 215 IPR004182 -
Armi18g00014 226 MobiDBLite consensus disorder prediction 11 25 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00014 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr18:289549 Armi4g02167 Armi-Chr4:92963126 dispersed
Armi Armi-Chr18:289549 Armi5g01066 Armi-Chr5:24509849 wgd