Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi18g00019 | ATGGCTGTTGTGAAGGCTGTTCATGTCTCTGATGTACCTCATCTTGATGAGCCCCTCCCTTCATTCTCTCTTTACACCACACCTCTTCCTACCTCAGTAGGAGGAGGATTGGATAATGGAAGTAGGAAATTCATGGTGGTAGGGCATAGAGGTCATGGCATGAACGTCTTACATTCCACCGATCGGAGAATGAAAGCCTACAAAGAGAACTCCATTCTTTCCTTCAACAACGCTGCCAATCACCCTTTAGATTTCATTGAGTTTGACGTTCAGGTCACCAAAGATGACATACCAATCATTTTCCACGACAATTTCATCCTCTCTCAAGAGAACGGTATTGTGGTTGAAAAGCGGGTGACTGATTTGACACTTGAAGAATTCTTTAGCTATGGTCCTCAAAGAGAAGTAGGACAGGTTGGGAAATGTTTGCTTAGGAAAACAAATGGAAATATCGTGGGTTGGGATGTTGAAGCCGATGATCATTCTTGTACCTTACAAGAAGCCTTCCAAAAAGTAAACCCTTGTTTGGGATTCAACATCGAGTTGAAGTTTGATGATTACATCGTATATGATCAACACCATCTCACCCATGTTCTTCAACTCATCTTCAACGTCGTTTCCAAAAACGCCCAACAAAGATCTGTCATTTTCTCAACTTTCCAGCCTGATGCAGCCCTGCTCATGAAGAAACTTCAGCATATTTACCCTGTGTACTTTTTGACAAATGGAGGAAATGAGGTATTTGATGATGTGCGAATGAATTCTTTGGAAGAAGCCAAGAAGGTGGCAATTGAGGGTGGATTGGATGGAATAGTTTCAGAAGTCATGGGTGTTTTTAGAAACCCAATGGTGGTTAGAGAGATTAAAGACTCCAACCTATCCCTCCTTACTTATGGGAAATTGAACAATGTTCCTGAAGCTGTGCAAGTTCAATATCTCATGGGTGTTGAGGGGGTGATTGTAGATTTGGTACAAGAGATTTCAAACGCAGTTGCAGATATGAAGACCAAAACCAAAGATGTAAATGGAGGAGGATTAGAGAAGATTGAGTTGTCATTTCTGCTTACATTGATTTCACAACTCGTACAACATTAA | 1095 | 41.28 | MAVVKAVHVSDVPHLDEPLPSFSLYTTPLPTSVGGGLDNGSRKFMVVGHRGHGMNVLHSTDRRMKAYKENSILSFNNAANHPLDFIEFDVQVTKDDIPIIFHDNFILSQENGIVVEKRVTDLTLEEFFSYGPQREVGQVGKCLLRKTNGNIVGWDVEADDHSCTLQEAFQKVNPCLGFNIELKFDDYIVYDQHHLTHVLQLIFNVVSKNAQQRSVIFSTFQPDAALLMKKLQHIYPVYFLTNGGNEVFDDVRMNSLEEAKKVAIEGGLDGIVSEVMGVFRNPMVVREIKDSNLSLLTYGKLNNVPEAVQVQYLMGVEGVIVDLVQEISNAVADMKTKTKDVNGGGLEKIELSFLLTLISQLVQH | 364 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi18g00019 | 364 | ProSiteProfiles | GP-PDE domain profile. | 44 | 331 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Armi18g00019 | 364 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 41 | 337 | IPR051578 | GO:0046475(PANTHER) | |
| Armi18g00019 | 364 | SUPERFAMILY | PLC-like phosphodiesterases | 43 | 325 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Armi18g00019 | 364 | FunFam | Glycerophosphodiester phosphodiesterase GDPD2 | 37 | 333 | - | - | |
| Armi18g00019 | 364 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 49 | 324 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Armi18g00019 | 364 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 38 | 332 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi18g00019 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 19977 | Armi18g00019 | Armi4g03169 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr18:314529 | Armi4g03169 | Armi-Chr4:118264403 | wgd | |
| Armi | Armi-Chr18:314529 | Armi5g01052 | Armi-Chr5:24255273 | wgd |