Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi18g00044 | ATGGACATGCAAAGTGATTTCGATCGGATTCTCTTCTTCGAGCATGCTCGCCGGAGTGCCGAAGTCACTTACGCCAAAAACCCTCTCGATACTGAGAACTTGACTAGATGGGGAGGGGCGTTGCTTGAATTGTCGACCTTCCAGAGTGTTCAGGAATCAAAAACTATGATTAAAGATGCTATATCAAAATTGGATGAAGCATTGTCGATTGATCCAAAGAGACATGATACCTTGTGGTGTATGGGCAATGCACAAACTTCTTATGCTTTTTTGACTCCTGATAAAGGAGAAGCTAAGGGTTATTTTGATTCAGCTTATACTTATTTTCAGCAGGCTGTTGATGAGGATCCAGGGAATGAACTTTACCGCAAATCATTGGAAGTGACTATCAAGGCACCTGAATTACACTCAGAGCTCCATAAACAGGGTCTGAGTCAACAAGCCATGGGACCAGGGTCCGGAGGGGGTCCTTCAACTTCTTCGAGTGTCAGGGGTCCGAAGGCACAAAAGAGCAGCGATCTGAAGTATGATATATTTGGATGGGTTATTCTTGCTGTTAGTATCGTGGCGTGGGTTGGATTCGCTAAAGCAAATGTACCTTCACCACCTCCACGATAA | 618 | 44.66 | MDMQSDFDRILFFEHARRSAEVTYAKNPLDTENLTRWGGALLELSTFQSVQESKTMIKDAISKLDEALSIDPKRHDTLWCMGNAQTSYAFLTPDKGEAKGYFDSAYTYFQQAVDEDPGNELYRKSLEVTIKAPELHSELHKQGLSQQAMGPGSGGGPSTSSSVRGPKAQKSSDLKYDIFGWVILAVSIVAWVGFAKANVPSPPPR | 205 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi18g00044 | 205 | MobiDBLite | consensus disorder prediction | 141 | 167 | - | - | |
| Armi18g00044 | 205 | Gene3D | Tetratricopeptide repeat domain | 1 | 149 | IPR011990 | GO:0005515(InterPro) | |
| Armi18g00044 | 205 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 7 | 196 | - | - | |
| Armi18g00044 | 205 | SUPERFAMILY | TPR-like | 13 | 126 | IPR011990 | GO:0005515(InterPro) | |
| Armi18g00044 | 205 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 204 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi18g00044 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr4:135989192 | Armi18g00044 | Armi-Chr18:606680 | transposed | |
| Armi | Armi-Chr18:606680 | Armi3g00071 | Armi-Chr3:1543048 | wgd | |
| Armi | Armi-Chr18:606680 | Armi5g01020 | Armi-Chr5:23028469 | wgd |