AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00045 ATGGCAGTCGCTTCCCTTCCTTCCTCCAATTTCACCGCTAAATCTTCACCCCTTTGTTTCGGCTTTCATAAGCCTTTCCTTCCGTCATCGTATGCTAATTTTGGATCACTGAAGAATAATCGTAATGGAGGAATTCAGATTACTGTTTGTAAAGCAGATCCTCCTTCTTCTTCCTCGTTGTCCTTTCGTTATCTCGATGCCGATGATTTTAGACATCCGCTCGACAAGCAGAATACGCTGCTTTTGAGGACAATTCCGGGTCTGAACGAAATTGGGAAGGCTTTATTAGGGAGCATAGCAGAACAGGTCCTGGTACTTGAAAATATAGGGACCTCCGTTCTTGTATCTGAAAATCAGCTTTCAGAACTTCATCAGTTAATGGCTCAATCAGCCGAAGCACTGAAAATTGAAGCTCCAGATCTGTATGTGCGGCAAAGTCCGGTACCTAATGCATATACTCTAGCCATCAATGGTAAAAAGCCGTTTGTTGTTGTTCATACAAGCCTTATAGAGCTTCTTTCAAGAAAAGAGTTGCAGGCTGTTTTGGCCCATGAGCTAGGACATCTTAAATGCGATCACGGTGTATGGCTGACAGTCGCAAATTTTCTTACCCTTGGAGCCTACACAATACCTGGGGTCGGTGGGATGATAGCCCAGAGATTAGAAGAACAACTATTTCGTTGGCTCCGGGCTGCAGAGCTTACCTGTGATCGAGCCGCTCTTCTTGTTGTTCAAGATCCCAAGGTGGTCATTTCTGTTCTAATGAAACTGGCTGGAGGATGCCCATCTTTGGCTGATCAACTTAATGTGGATGCTTTTCTAGAGCAAGCCCGATCTTATGACAAAGCATCTGCAAGTCCGGTAGGATGGTATATAAGAAACGCACAAACGAGACAACTTTCACATCCTCTTCCTGTACTAAGAGCCCGTGAGATTGACGAGTGGTCAAGAAGTCAAGATTATAAATCGCTCATGCAACGTGCCACACGTACAAACTCTTAG 1002 44.61 MAVASLPSSNFTAKSSPLCFGFHKPFLPSSYANFGSLKNNRNGGIQITVCKADPPSSSSLSFRYLDADDFRHPLDKQNTLLLRTIPGLNEIGKALLGSIAEQVLVLENIGTSVLVSENQLSELHQLMAQSAEALKIEAPDLYVRQSPVPNAYTLAINGKKPFVVVHTSLIELLSRKELQAVLAHELGHLKCDHGVWLTVANFLTLGAYTIPGVGGMIAQRLEEQLFRWLRAAELTCDRAALLVVQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKASASPVGWYIRNAQTRQLSHPLPVLRAREIDEWSRSQDYKSLMQRATRTNS 333
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00045 333 Pfam Peptidase family M48 121 315 IPR001915 GO:0004222(InterPro)|GO:0006508(InterPro)
Armi18g00045 333 PANTHER CAAX PRENYL PROTEASE 1 55 321 - GO:0004222(PANTHER)|GO:0030176(PANTHER)|GO:0071586(PANTHER)
Armi18g00045 333 FunFam Peptidase M48 family protein 113 201 - -
Armi18g00045 333 CDD M48-Ste24p-like 109 314 - -
Armi18g00045 333 Gene3D Metalloproteases (zincins), catalytic domain 114 201 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00045 - -