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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi18g00048 ATGGGTGCTTGTGTGTCGATTCATCATAAAGCTTCTGCAATGAAGGTGCAAGTGTCGTTTGATTCTTCAAAACCTGATCATAAGTTGGTGATTCAATCTTCCCCAATTAGCGGTAAACTTCCCACCATGATCAATGGACATGTTGCTGTTAAACCTCAGTTGCCTCCATCTCAATCACCGGCTGCTTTTTCCAATTATGGTAGTAAAGAGGAGACCTTCTTTGACTCCCAAGCATGGTTAGATTCAGATTATGAAGATGACTTTATGAGTGTTAATGGTGAATTTACCCCGTCAAGAGGCAATACCCCGGTACACCATAGCTTGACCGTAGGAACCCCACAATTCAACGCAGGAGCCATAGCCATCCCCTCAGACAACAACGAAGTTTTTGGTTCCACACTTGAGCCATCCCCAACTCCAACCGAAAAGAAGATGAGACTTTTGGACCTTTTTAAAGAAAGCCTAAGAGAAAAGCTTGAATCCAATGAGGAATTTGGTGAACCACCCAAGAAAGATGGTGAAATGGGCTTGAACGAAGATGGTTCGAAGCCGAAACGGGGGGCGTACGTGGGTTCTATGCAGGGTTGCTTTTCTACGTTGCTTTCTGTTCGTAGCTCGGGACGGCAAAAGAAGAAGAGCCCGATTCCGGTTGTTGGGTTATAA 663 45.1 MGACVSIHHKASAMKVQVSFDSSKPDHKLVIQSSPISGKLPTMINGHVAVKPQLPPSQSPAAFSNYGSKEETFFDSQAWLDSDYEDDFMSVNGEFTPSRGNTPVHHSLTVGTPQFNAGAIAIPSDNNEVFGSTLEPSPTPTEKKMRLLDLFKESLREKLESNEEFGEPPKKDGEMGLNEDGSKPKRGAYVGSMQGCFSTLLSVRSSGRQKKKSPIPVVGL 220
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi18g00048 220 MobiDBLite consensus disorder prediction 159 189 - -
Armi18g00048 220 MobiDBLite consensus disorder prediction 159 181 - -
Armi18g00048 220 PANTHER OS01G0920100 PROTEIN 1 213 IPR038947 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi18g00048 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
18896 Armi13g00018 Armi18g00048
19983 Armi18g00048 Armi4g03136
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr13:264112 Armi18g00048 Armi-Chr18:636052 wgd
Armi Armi-Chr18:636052 Armi4g03136 Armi-Chr4:117654531 wgd