AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00024 ATGGAGGATATGTTTGTGGCAATCCTTTCAATGCTTCTAGTTGTTGCTTTAATTCCACTTTACCTATGGAGACGACGACAGGTTCCGCAGTCTCATGATGAACATGAAGAAGAAGCTCAGGTTCAGCAGAGAGAAACTGTTGTGAGGCCTACTGGTACTCGTAGTAGGATGCGTAGACGGCATACTTCAGCAGCCAGCACATCTTCTGCTCCACAAGCTGTAGAAGAATCTGATGATGGAAGTGATGAGGAAGCTGTTGAAGGGGAATATTATAATGCAAAATCATCAAAGAAGAAAGGAAGGAAGAAAGAGGAACGCCAAGCACAACGGCAGGCTGAAGAGGCCGCAAGGGAGTCGAGACATACAAAACAAGACCGTTATGCAGAAATTCGCAGGAGGAAGGATGAGGAACACGAAGCAAGGGAGCGTATGCTGGAAGAAGAAGCCGAGGCTCAGAAGGCCAAGGAGGAGGAAGCTGCAGCGTTAGAGTTTGAGAAGTGGAAAGGAGAATTTTCAGTAGATGCTGAAGGAACTACAGAAAATGAAGTTCAAGATGGAAGCCAGGGACTGCTTTACGATTTTGTGGAGTATATCAAGAAACAGAAATGTGTTCCCTTGGAAGATCTTGCTGCAGAATTCAAACTACGGACTCAGGACTGTATCAATCGGATCACCTCACTTGAAGATATGGGGAGATTATCTGGTGTGATGGATGATAGAGGAAAATACATACACATCTCTTATGAAGAAATGCAGGCAGTTGCAGACTACATCAAGCGTGAAGGGAGGGTGAGCATTGCTCATCTAGCCAGCAAGTCCAACCAGTTCATAGATTTGGAACCCAAAGCACCACTGATTGAGGAGGATTTAGGAGCTCAAGATGAGATTGCAGTGGCTTGA 900 45.44 MEDMFVAILSMLLVVALIPLYLWRRRQVPQSHDEHEEEAQVQQRETVVRPTGTRSRMRRRHTSAASTSSAPQAVEESDDGSDEEAVEGEYYNAKSSKKKGRKKEERQAQRQAEEAARESRHTKQDRYAEIRRRKDEEHEARERMLEEEAEAQKAKEEEAAALEFEKWKGEFSVDAEGTTENEVQDGSQGLLYDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIHISYEEMQAVADYIKREGRVSIAHLASKSNQFIDLEPKAPLIEEDLGAQDEIAVA 299
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00024 299 MobiDBLite consensus disorder prediction 105 157 - -
Armi1g00024 299 Gene3D - 189 246 IPR036388 -
Armi1g00024 299 SUPERFAMILY Winged helix DNA-binding domain 185 254 IPR036390 -
Armi1g00024 299 Coils Coil 127 165 - -
Armi1g00024 299 MobiDBLite consensus disorder prediction 32 157 - -
Armi1g00024 299 SMART DDRGK-2 93 278 IPR019153 -
Armi1g00024 299 Pfam DDRGK domain 93 278 IPR019153 -
Armi1g00024 299 FunFam DDRGK domain-containing protein 1 189 246 - -
Armi1g00024 299 Coils Coil 98 125 - -
Armi1g00024 299 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 82 288 IPR050899 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00024 K23344 DDRGK domain-containing protein 1