Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00027	ATGGCGAAATCGGTTGTTGTTTTTTTCGGGGTTCTAAGTCTTTTGTTGTTGATCCAGGACAGTGGTGCATACGAGTTCATGGTCGGAGGTTCCGGTGATTGGAGTCTTGCATCAACCTCCTATAATCAATGGGCCGAACAAAGCCGTTTTCAAATTGGTGACACCGTTTTGTTCAATTACGAGGAGGGGAAGGACTCGGTGGTTCAAGTGACCAAAGATGACTACAACAACTGCAACCCAGCATCACCCATTGCCATGTATAGCGATGGTCATTCCCTGGTCAAGTTCCAACAATCTGGCCCTCACTATTTCATAAGTGGAATCGTACAAAACTGTAAGAACAACCAAAAGATTGTCATGGTTGTCATGGCAGATCGAACCAACCACACGGCTTCGTCTCCATCTCCATCTCTACCTCCTTCTCCTCCTCCTCCTCCTCCTCCGGTAGAAGATTATAACCCGAATGCTGCAATTTCAATCGTCACAAGCTTCGTTTACTCTATTGTCGCTTTTATTGGCTCTTCACTTGTCTTTGTCTAG	540	45.74	MAKSVVVFFGVLSLLLLIQDSGAYEFMVGGSGDWSLASTSYNQWAEQSRFQIGDTVLFNYEEGKDSVVQVTKDDYNNCNPASPIAMYSDGHSLVKFQQSGPHYFISGIVQNCKNNQKIVMVVMADRTNHTASSPSPSLPPSPPPPPPPVEDYNPNAAISIVTSFVYSIVAFIGSSLVFV	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00027	179	MobiDBLite	consensus disorder prediction	135	150	-	-
	Armi1g00027	179	ProSiteProfiles	Phytocyanin domain profile.	24	124	IPR003245	GO:0009055(InterPro)
	Armi1g00027	179	FunFam	Early nodulin-like protein 1	23	127	-	-
	Armi1g00027	179	SUPERFAMILY	Cupredoxins	23	123	IPR008972	-
	Armi1g00027	179	Gene3D	-	24	135	IPR008972	-
	Armi1g00027	179	PANTHER	BLUE COPPER PROTEIN	16	134	IPR039391	GO:0009055(InterPro)\|GO:0046658(PANTHER)
	Armi1g00027	179	MobiDBLite	consensus disorder prediction	128	150	-	-
	Armi1g00027	179	Pfam	Plastocyanin-like domain	34	115	IPR003245	GO:0009055(InterPro)
	Armi1g00027	179	CDD	OsENODL1-like	24	123	IPR041846	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00027	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	19340	Armi14g01538	Armi1g00027
	20142	Armi1g00027	Armi8g02690

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	373457	Armi	Armi1g00027	Armi-Chr1:772481	Armi5g01309	Armi-Chr5:30051859
	412409	Armi	Armi1g00027	Armi-Chr1:772481	Armi14g01538	Armi-Chr14:75984401
	419911	Armi	Armi1g00027	Armi-Chr1:772481	Armi8g02690	Armi-Chr8:96775491

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Armi1g00027	ACH	13	202	PhytocyaNIN gene family	AT3G20570	42.708	4.52e-46	148.0
	Armi1g00369	ACH	1	267	PhytocyaNIN gene family	AT5G53870	37.818	7.31e-53	174.0
	Armi1g01633	.	19	136	PhytocyaNIN gene family	AT1G17800	36.975	1.49e-20	79.3
	Armi2g00225	ACH	8	150	PhytocyaNIN gene family	AT1G79800	46.154	2.43e-43	141.0
	Armi2g01133	.	8	129	PhytocyaNIN gene family	AT1G48940	54.839	7.79e-49	154.0
	Armi3g01116	.	14	155	PhytocyaNIN gene family	AT1G08500	43.75	4.88e-35	122.0
	Armi4g01035	.	12	201	PhytocyaNIN gene family	AT1G08500	57.368	1.28e-70	214.0
	Armi5g01309	.	3	193	PhytocyaNIN gene family	AT4G28365	40.513	1.54e-43	142.0
	Armi7g00103	ACH	21	133	PhytocyaNIN gene family	AT1G79800	46.903	3.78e-36	123.0
	Armi7g01819	.	18	167	PhytocyaNIN gene family	AT5G57920	46.753	1.10e-42	139.0
	Armi8g02578	ACH	3	193	PhytocyaNIN gene family	AT5G53870	47.087	9.01e-50	167.0
	Armi8g02690	ACH	9	182	PhytocyaNIN gene family	AT3G20570	41.711	2.14e-45	147.0
	Armi10g00352	.	45	120	PhytocyaNIN gene family	AT1G64640	52.632	5.96e-21	87.8
	Armi10g00356	.	33	160	PhytocyaNIN gene family	AT1G64640	60.294	2.07e-49	157.0
	Armi12g00245	.	2	164	PhytocyaNIN gene family	AT5G15350	38.037	1.27e-41	135.0
	Armi13g00246	.	3	139	PhytocyaNIN gene family	AT5G15350	46.715	2.48e-39	130.0
	Armi13g00248	.	9	168	PhytocyaNIN gene family	AT5G15350	52.761	9.65e-58	177.0
	Armi14g01538	ACH	6	183	PhytocyaNIN gene family	AT3G20570	44.944	2.30e-46	149.0