Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00028	ATGGTTTCGACAGCCAAGATCAAATCTGTTGATTTTTACAGGAAAATTCCAAGAGATTTGACAGAGGCGTCACTATCAGGTGCCGGCTTGTCTATTATAGCCGCTTTTGCCATGACGTTTTTATTTGGAATGGAGCTGCATAACTATTTGGCTGTCAGTACCTCGACTTCTGTCATAGTTGACAGAAGTTCTGACGGGGATTACTTACGGATTGATTTTAATATTAGTTTACCGGCCTTATCCTGTGAGTTTGCATCTGTGGATGTGAGTGATGTACTGGGAACTAACAGGTTGAACATAACAAAAACAGTTCGCAAATACTCAATTGATAAACATCTACGAACTACTGGCTCTGAGTTTGATTCTGGACCAGTTACTAATATACTCAAGCATGATGATGAAGTTGATGAGGAATATGGTGAAGGATCTGTTACTCTAAATGCACGTAATTTTGATAAAGTTTCTCATCAGCATTCAATTTTGGTTGTAAATTTCTATGCCCCTTGGTGCTATTGGAGTAACCGTCTGAAACCCTCATGGGAGAAGGCAGCCAAAATTATGAGAGAAAGACATGATCCAGAAGTGGATGGTCGTATCATTATGGGCAAGGTAGACTGTACTGAAGAAGTTGATCTGTGTAGGAGGCACCACATACAAGGTTATCCGTCTATTCGGATATTCCGCAAGGGCAGTGATGTCAGGGATGAGCATGGGCACCACGAGCATGAATCATATTATGGTGACAGAGATACAGAGACCTTGGTGACTACAATGGAAAACTTGGTTGCACCTATTGCATTGGAGTCGCCAATCCTGGCCTTGGAGGACAAATCTGGCAAGACAGCAGAGAGTGCAAAAAGACCTGCACCACGTGAAGCAGGATGTAGAATTGAAGGGTTTGTACGAGTCAAGAAGGTTCCTGGTAATCTTGTAATCTCAGCCCGTTCGAGGTCCCATTCCTTTGATGCTTCCCAGATGAACATGTCACATGTAATTTCTACTTTTTCGTTTGGTAAGAAGATCAGTTCAAGGGTGATGAGTGATATTAAGCGAATACTACCTCACATTGGTGTAAGCCATGACAAGTTGAATGGCCAGGCATATCTCACTGACCCAGAAGATCGTGCAAATGTTACGATAGAGCATTATCTTCAAGTTGTGAAGACTGAGGTTATGAGGTCGTCTCATCAACTTATTGAGGATTACGAGTACACAGCACATAGTAGCTTAACGCATGCTCTTTCCATCCCTGTTGTAAAGTTCCATTTTGAGCTATCTCCAATGCAGGTTTTGATAACGGAAAATTCCAAATCGTTTTCTCATTTCATCACCAACGTCTGTGCCATTATTGGTGGTGTTTTCACGGTTGCTGGGATACTGGATTCAATTCTGCACAACACGTTGAGATTGGTGAAAAAAGTTGAACTGGGGAAGAATTTTTAG	1443	41.93	MVSTAKIKSVDFYRKIPRDLTEASLSGAGLSIIAAFAMTFLFGMELHNYLAVSTSTSVIVDRSSDGDYLRIDFNISLPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDKHLRTTGSEFDSGPVTNILKHDDEVDEEYGEGSVTLNARNFDKVSHQHSILVVNFYAPWCYWSNRLKPSWEKAAKIMRERHDPEVDGRIIMGKVDCTEEVDLCRRHHIQGYPSIRIFRKGSDVRDEHGHHEHESYYGDRDTETLVTTMENLVAPIALESPILALEDKSGKTAESAKRPAPREAGCRIEGFVRVKKVPGNLVISARSRSHSFDASQMNMSHVISTFSFGKKISSRVMSDIKRILPHIGVSHDKLNGQAYLTDPEDRANVTIEHYLQVVKTEVMRSSHQLIEDYEYTAHSSLTHALSIPVVKFHFELSPMQVLITENSKSFSHFITNVCAIIGGVFTVAGILDSILHNTLRLVKKVELGKNF	480

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00028	480	CDD	PDI-a-family	144	258	-	-
	Armi1g00028	480	FunFam	Protein disulfide-isomerase 5-4	131	287	-	-
	Armi1g00028	480	ProSiteProfiles	Thioredoxin domain profile.	114	263	IPR013766	-
	Armi1g00028	480	Pfam	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)	7	97	IPR039542	-
	Armi1g00028	480	Gene3D	Glutaredoxin	134	291	-	-
	Armi1g00028	480	PANTHER	ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN	1	474	IPR045888	GO:0005783(PANTHER)\|GO:0030134(PANTHER)
	Armi1g00028	480	Pfam	Endoplasmic reticulum vesicle transporter	289	461	IPR012936	-
	Armi1g00028	480	SUPERFAMILY	Thioredoxin-like	139	261	IPR036249	-
	Armi1g00028	480	Pfam	Thioredoxin	144	243	IPR013766	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00028	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	19342	Armi14g01539	Armi1g00028
	20143	Armi1g00028	Armi8g02691

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	368160	Armi	Armi15g00482	Armi-Chr15:21124865	Armi1g00028	Armi-Chr1:773715
	373458	Armi	Armi1g00028	Armi-Chr1:773715	Armi2g03562	Armi-Chr2:172003482
	407168	Armi	Armi5g01230	Armi-Chr5:28162552	Armi1g00028	Armi-Chr1:773715
	412410	Armi	Armi1g00028	Armi-Chr1:773715	Armi14g01539	Armi-Chr14:75986755
	419912	Armi	Armi1g00028	Armi-Chr1:773715	Armi8g02691	Armi-Chr8:96777245