AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00035 ATGGCGGAAGACACCATCATGGAAGAGAGAGAGGAGTTCATGGTATCACGAAATTTTACTCAACTACACCATCAACCAAAATGCAAACTTGCCCGATTTCTAAAACCGTCTGTTACTTCCACTGATGTTCAACCCTTTTTCTACAATCGTCCCCAATTTTATTCTTCCAAGCTGTCCTTCAACTTCAATGGCTGGAGATCCCCACCAAAGGATTGGAAACCCTGGGTTGATCGCATGCATTCTCTGCACCAATCCACCTGGAAAAGAGCAGGAATATATCATGCCGTCTTGAATTCTTCATACGAAATCATGAAAACCGATGATTCGATCATAGGGCTTGCAGAAAAATGGAGTCGTGAGACCAACTCCTTCGTGTTCGTATGGGGAGAAGCTACAATCACTTTAGAAGACATGATCGTTCTTGGAGGTTACTCTGTTTTAGGTCAATCTGTTCTCAATCCTGCTGAAATCAGAGAATCACAAACAATTTTAACGAAATTGGATGAAGCAAGGGTAGGGATTTCAAGAGGTAAGTCTAATAAAGCATCTCAGAGTGGATGGTTAAAAAAATTCAAAGGCAGTGGAAGTGAAATCGAGCATGAAGCATTTCTTGTATTGTGGTTATCCAGGTTTGTCTTCCCTTCATCATACAGCACTGTTGTGAGAAATGTTCACACCATTGCTATTCATTTAGCTAGAGGTATCAGAATTGCTCTTGCACCTGCTGTTCTTGCCAGCCTATACAGAGATTTGAGCTTGTTAAAAGCTAAAATGGATGATTCCATGAACTCGAACAATGGTGATTATGATAATGAGATTTCAATTACAGTTTGGGCTCCTTTACAACTTGTTCAAATCTGGATTTGGGAGAGATTACCCAAACTTACGCAATCGGTTTGTAATGTTGGAGATAGTTGCAAGCCAAGGTTTTCTAGATGGGACAAGAAGAAGTTGCACATATACAATGCTGGCTCACTTTTAGATTGTGCTTTAGAAAAATTTACTTGGCGACCGTATGTCACGAGTGGAAATGATAATTTGTTTTCTTGCAAGGTTTATCAAGAAAAGGGAAGGTGGGTTGTAGTTGGTGATTGCTTGGATGAAGAATTGGAGTCATGGGTTCGATGTTTGAGAGCTTCTGAACTAGTTGGGATATGTGGAAGTTGTATCGAACAATACCTACCTCATAGAGTTGCAATGCAATTTGGGATGGACCAAGATATTCCTGGTGATGTGCCACGGACCAATGCATCTCCTGAAACCGCGTGGAGGTTTTACACGCGGCCAATTAGGGATGTTAAAGTGTATCTTCCATCCAAATTCTGTGAGCCATATGTGACTGCTAGATACTTGGAATGGTGGAATAAGTCGGTTGGGGTCCAAGCAAGAAGCTCTCCCATGGGTGATGATGAAACATTGGAAAGTTTTGACAAAGATGAATCAAGAACCGAAGGGTCCAAAGAAGGTGGGGTCCAAGCAAGAAGCTCTCCCATGGGTGATGATGAAACATTGGAAAGTTTTGACAAATATGAATCAAGAACTGAAGGGTCCAAAGAAGGTGGGGTCCAAGCAAGAAGCTCTCCCATGGGTGATGATGAAACAATGGAAAGTTCTGTCAAAGATGAATCAAGAGCTGAAGTGTCAAAAGAATTTGTGGATGGCACCAAAACTGGAGATGTAGCAAACCTTGGCAGCAATGAGGTTACTACATTGGGATTGGAACTTGAAACCAGAATCAGAAAACTAGAGGAAGTTTTTGCACATCTCAAATCTAAAAAAATTGGTCACAGGTTAATGTAG 1800 41.33 MAEDTIMEEREEFMVSRNFTQLHHQPKCKLARFLKPSVTSTDVQPFFYNRPQFYSSKLSFNFNGWRSPPKDWKPWVDRMHSLHQSTWKRAGIYHAVLNSSYEIMKTDDSIIGLAEKWSRETNSFVFVWGEATITLEDMIVLGGYSVLGQSVLNPAEIRESQTILTKLDEARVGISRGKSNKASQSGWLKKFKGSGSEIEHEAFLVLWLSRFVFPSSYSTVVRNVHTIAIHLARGIRIALAPAVLASLYRDLSLLKAKMDDSMNSNNGDYDNEISITVWAPLQLVQIWIWERLPKLTQSVCNVGDSCKPRFSRWDKKKLHIYNAGSLLDCALEKFTWRPYVTSGNDNLFSCKVYQEKGRWVVVGDCLDEELESWVRCLRASELVGICGSCIEQYLPHRVAMQFGMDQDIPGDVPRTNASPETAWRFYTRPIRDVKVYLPSKFCEPYVTARYLEWWNKSVGVQARSSPMGDDETLESFDKDESRTEGSKEGGVQARSSPMGDDETLESFDKYESRTEGSKEGGVQARSSPMGDDETMESSVKDESRAEVSKEFVDGTKTGDVANLGSNEVTTLGLELETRIRKLEEVFAHLKSKKIGHRLM 599
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00035 599 MobiDBLite consensus disorder prediction 470 487 - -
Armi1g00035 599 Pfam Plant mobile domain 91 455 IPR019557 -
Armi1g00035 599 MobiDBLite consensus disorder prediction 534 548 - -
Armi1g00035 599 PANTHER PROTEIN MAIN-LIKE 2 52 549 IPR044824 GO:0010073(InterPro)|GO:0048507(InterPro)
Armi1g00035 599 MobiDBLite consensus disorder prediction 461 548 - -
Armi1g00035 599 MobiDBLite consensus disorder prediction 501 518 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00035 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20146 Armi1g00035 Armi8g02707
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
373465 Armi Armi1g00035 Armi-Chr1:816650 Armi8g02707 Armi-Chr8:96975839
400222 Armi Armi1g00034 Armi-Chr1:811696 Armi1g00035 Armi-Chr1:816650