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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00039 ATGTCGGATCTTGTCTTCCTTCTTTCCACACTCTCATACAATTACATTCTGCAGTTGCTTAATAGAATCATCTCTTCCTTTCGAACTTTCATGGAAGTTAATATCGATCAAGATAACCAGGTTCAGACTCTGGAAGCCATCAAGGGTGGTGGAGGATCCATCAAAGTTGGAACCACCGGCACCATTAATGCCTTAATGACAAGGGAACTACTGTCGATCAAAGTTGGATCTCCAAAGACAGTCCCATCTACAGTCAGATCGCCGAAAACAGCCTTAGAACCTAATGATGCTGCTAAAGATACAAAACCGAAAGCAAGAGTACAAGCAGATGAAGCAAGCACTAGTAGCAGCAACACCATGAATGAAAAACATGCCAGCATTCCCCAGAAAACCAAACACCACCATACTAGAAAAGGTAGCAGGAATCCTATTCTCCATCATTCTGATAGCGTATCTGTTGATGGAAGTGGAGGTCCTAATACAAGGAAAAACGACAAGAAGGGATCTTGCATGGTTGAGATAGTGGACATAAAATGTGGAGTACCTGACAAGAACTGGGCTAATCCCATAACAAACAGGTTCAAGAAACTCAGTTTCTCAAAGCTTTCTGAAACCAATGGTGTAAAGTGA 630 42.06 MSDLVFLLSTLSYNYILQLLNRIISSFRTFMEVNIDQDNQVQTLEAIKGGGGSIKVGTTGTINALMTRELLSIKVGSPKTVPSTVRSPKTALEPNDAAKDTKPKARVQADEASTSSSNTMNEKHASIPQKTKHHHTRKGSRNPILHHSDSVSVDGSGGPNTRKNDKKGSCMVEIVDIKCGVPDKNWANPITNRFKKLSFSKLSETNGVK 209
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00039 209 MobiDBLite consensus disorder prediction 77 166 - -
Armi1g00039 209 MobiDBLite consensus disorder prediction 145 163 - -
Armi1g00039 209 MobiDBLite consensus disorder prediction 108 125 - -
Armi1g00039 209 PANTHER BNAA10G09140D PROTEIN 41 206 - -
Armi1g00039 209 MobiDBLite consensus disorder prediction 93 107 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00039 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
373468 Armi Armi1g00039 Armi-Chr1:829066 Armi7g00303 Armi-Chr7:5348587
400223 Armi Armi1g00038 Armi-Chr1:829066 Armi1g00039 Armi-Chr1:829066