AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00048 ATGGCACCCCCTTCTTCTTCATCCATCTTCTTCTGCAAACCCTACTTTCTAATCATCCTCATCGCTATCTTAACCCTTTCTTGTACCCATACTTCACAGGTACAAGCCATTAAAGCACCAATTCATCCACAAGACATACTCCCACTTTTGCCCCATCAAATTTCATGGCCCATTCTCAACTCTCTTCGAGGTGCCGCCGATCTTCTCCCGAGTTTCGTCGGCGCAGCGTCGATTTCAAATAATTCCGGTTTGAATTGGAAGGGGTCTTGCTTTTATCAGAACACTGCGTGGTTAGAGCTCCACAATAAAAGTGGTAGTCAATTTGGTGGAGGCACTCTTCATATCAAGGTAAGTGATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACATGGGACTATTACTTTTTATCCCGTGAGCATACACTTGAGTTCGACGAATGGGGAGGGAAAGCCGAGTATGAATATGTAAAACATAAGGGCATTGCCATTTTTCTCATGGAAGCAGGGATGTTAGGCACCTTAAAAGCATTATGGGAGGTCTTCCCCCTGTTCACAAATACTGGATGGGGTGAAAGTTCTAATCTTGCTTTTCTCAAGAAGCATATGGGAGCTACCTTTGAAGCACGTCCTGAGCCATGGGTTACAAACATCACCGTAGATGACATACACTCGGGAGACTTCCTTGCGATATCAAAAATTCGTGGTCGATGGGGCGGTTTTGAGACGCTTGAGAAATGGGTATCTGGGGCATATGCGGGTCATTCTGCCGTTTGCTTGAGGGATGCCGAAGGAAAACTATGGGTTGGGGAATCCGGACATGAAGATGAAGAGGGCCAAGATGTTATTGCTTTGTTGCCGTGGGATGAGTGGTGGAACTTTGAGCTGACGGAAGATGATGCTAATCCACATATTGCATTGCTTCCTTTGCATCCTGACCTTCGATCTAAGTTTAACGAGACGGCTGCATGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTATCATAATTTGATATTTAGCTGGATAGACACTATAAGTGATAATTACCCACCACCTTTGGATGCTCATCTGGTTGCTTCCGTTATGACCGTGTGGAATCAACTGCAGCCCGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTCAGGGGCTTGACCTTCCTGATATTTTGGTCGAAGTGGAAAGGCGTGGTTCATCTTTTGCTGAACTACTGACTATACCTGAACAAGATGAGTGGGTATACGCTGATGGAAAATCGACTTCTTGTGTTGCATTCGTCCTTGAAATGTACAAGGAAGCAGGACTCTTCGGAGATCTTGCAAGCCAAATTCAAGTTACCGAGTTCACGATAAAGGATGCTTACATGCTCAACTTTTTTGAAAACAATTCGAGTCGGCTGCCAAAGTGGTGTAATGAAGGGGACACGGTAGAGCTTCCGTTCTGTCAAATCAAAGGGAAGTATCGAATGGAATTACCTGAATACAATACTATCGATCCATACCCTCATATGACTGAACGTTGCCCGTCACTTCCCCCAGACTATTCAAGGCCAGACTACTGCTGA 1611 45.07 MAPPSSSSIFFCKPYFLIILIAILTLSCTHTSQVQAIKAPIHPQDILPLLPHQISWPILNSLRGAADLLPSFVGAASISNNSGLNWKGSCFYQNTAWLELHNKSGSQFGGGTLHIKVSDAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWGGKAEYEYVKHKGIAIFLMEAGMLGTLKALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDAEGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDANPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNQLQPAYAANMWNEALNKRLGTQGLDLPDILVEVERRGSSFAELLTIPEQDEWVYADGKSTSCVAFVLEMYKEAGLFGDLASQIQVTEFTIKDAYMLNFFENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPEYNTIDPYPHMTERCPSLPPDYSRPDYC 536
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00048 536 PANTHER OS01G0793500 PROTEIN 16 536 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00048 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
19346 Armi14g01554 Armi1g00048
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
373474 Armi Armi1g00048 Armi-Chr1:918814 Armi3g00183 Armi-Chr3:3868930
412412 Armi Armi1g00048 Armi-Chr1:918814 Armi14g01554 Armi-Chr14:76195418