Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00054	ATGGGTTGCAGAAATGGAGGTGAATTCCAATCGCAAGAAGACGAAAGAAGATCATCATCGATTGTGAACGATGCGTTGCTGTTAACAACCATGTGCATCATTGGGTTCCCTGTTGATGTTCACATCAAGGATGGTTCCGTTTATTCTGGAATCTTCCACACCGCTTCGGTTGATGACCATTATGCTATCGTGTTGAAACGAGCAAGGATGATCAAGAAGGGAAGTTGTGATTCGAACGTGGCGAATGAGGGGGTGATAGGAACACTTGTAATCCAGTCGGAGGATCTTGTCCAAGTGGTTGCGAAGAGAGTACTGCTTCCGGCGGATGGTTTTGCTGGACATGAAACCGGGGATGATACAGAGGCTGTGGCACGCGCTTTTCCTTCTAACGGAACTCCATTGACAGAAGCAAATAAAACGATCTCTAGCAAGTCAAATGTCGATCAGCCACATGCTAATCAAACAAGATGCTCGTCGGGAACTGAGAACGGGCTTGCTAACGGATTTAAACCCGAGCATGCTATTCACTCGAGCAATAATATTGAAGTCGATAGAAAAGCAGACGTCAAAGGTCCAACAAAGAAAGAAGAATCTTTGAACGATCAAGATGATGACAGAAAGAACGGTGGTTGCAGATCGGAAGGAGGTTTACACAACAACGTAACGAAGGCTGACAACCAAAAGGAACAAACTACTAATGAAGTTCAAGCGAAACCATCGAAAGTTGCTGCTAACGGAGTACTCCCTGATGGTTCCGCTTCTTCTACTTCCAAGAAACAAGAAACCGATGATGTTGTTCCTTCTGCTACCATATCTTCGGAACCAAATGAACCCGTCACTTCAAAAATCTCGAATCCTAATCGAGCCGCTAAGGAATTTAAACTTAACCCTGGTGCAAAGATATTTTCACCATCGTTTCCGAATAAGAGATCGGCTACTCCTCCAGCCATGCCAACGGGTGCGAATCTTGCATACGTTCCGGACAGTTATCCTGCTGTACCGGTTGCCACTCCGCAGCCGGAAGTTGAAATCAGCCCGCCGTATGCTCATCATCGTTCAGTGCCGGTTAAGTTTGTTCCATATGGTAACTTGCTTTCCGGAAATGGAGGCGGCGATGTTCAACATCCTCCACCTATTGTTGGATATGTGGCAAATAGGAGTCAGCCGGTTAGATACGGTGGGCAATATCATCCTGTTCAAACAGCGCCTACCTATGTTCAACCAAGCTCTCAGAATGTAATGGTTGGAAGATTGGGACCGGTTTTCTACGTCCATCCACTTCCTCAAGATATGGTCCCGAGTACAACCGGTTTCTCTCAAGGGTCTACGTGCTCTATCTTAACTCCGCACCAAGTCCATGTCCCTAAACACCAAGGAACCGGAGCGGCCCAAGCGTTGCAGCTATATGCGACACCTCCATTTATAGCCGCGGGTGGTCAGGCACCGTTTGTGTTGCCGAGCCACATTCCGATATCGCAGCCGCCGTACCCGGTGATTCGACCGATCCCTGTCCCGGGATCTAATGGTTTCTTAGTATCAAAATATTCTTGA	1551	47.26	MGCRNGGEFQSQEDERRSSSIVNDALLLTTMCIIGFPVDVHIKDGSVYSGIFHTASVDDHYAIVLKRARMIKKGSCDSNVANEGVIGTLVIQSEDLVQVVAKRVLLPADGFAGHETGDDTEAVARAFPSNGTPLTEANKTISSKSNVDQPHANQTRCSSGTENGLANGFKPEHAIHSSNNIEVDRKADVKGPTKKEESLNDQDDDRKNGGCRSEGGLHNNVTKADNQKEQTTNEVQAKPSKVAANGVLPDGSASSTSKKQETDDVVPSATISSEPNEPVTSKISNPNRAAKEFKLNPGAKIFSPSFPNKRSATPPAMPTGANLAYVPDSYPAVPVATPQPEVEISPPYAHHRSVPVKFVPYGNLLSGNGGGDVQHPPPIVGYVANRSQPVRYGGQYHPVQTAPTYVQPSSQNVMVGRLGPVFYVHPLPQDMVPSTTGFSQGSTCSILTPHQVHVPKHQGTGAAQALQLYATPPFIAAGGQAPFVLPSHIPISQPPYPVIRPIPVPGSNGFLVSKYS	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00054	516	MobiDBLite	consensus disorder prediction	249	287	-	-
	Armi1g00054	516	PANTHER	ATAXIN 2-RELATED	145	486	IPR045117	GO:0003723(InterPro)\|GO:0003729(PANTHER)\|GO:0010494(PANTHER)\|GO:0034063(PANTHER)
	Armi1g00054	516	Pfam	Ataxin 2 SM domain	23	102	IPR025852	-
	Armi1g00054	516	MobiDBLite	consensus disorder prediction	177	212	-	-
	Armi1g00054	516	MobiDBLite	consensus disorder prediction	131	165	-	-
	Armi1g00054	516	MobiDBLite	consensus disorder prediction	219	239	-	-
	Armi1g00054	516	MobiDBLite	consensus disorder prediction	128	288	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00054	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	373480	Armi	Armi1g00054	Armi-Chr1:962639	Armi2g01494	Armi-Chr2:51513618