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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00062 ATGGAAAGTGAGTATGGTATGTACAGAAAAGGAAGCAGTGGGTGGTCATCCATGGTTGGAAATGAAGAATTTCAAGAAACTGATATTTGGTCTGTTTTGAATGAAAGAAAAGGTAAATTTGATTCAAAGTTTGAACGATCATCATCTTCAAGAGCTATTTCTTTTCCAAGTGCAGCCAGAATGATTCCTAGGTCTAGTACCACCACCACCACCACCAACAATCCTGAGGTTCCTCAACAACAATCAGCACCAGTCAACATTCCTGATTGGTCAAAGATCTATGGTAATAAGTCAAAGAGATCATCACAGAACTCTGCATGGCTTGATTATGGTGATGATGATGATGATGGTCATGATGGCAGATTGAATTGGGACAGTGATGATGATGATGATGATGATAATGGAAACATGATGCCTCCTCATGAATGGATTGCACAGAAGCTTGCAAGAAGTCAGATTTCTTCATTTTCTGTGTGTGAAGGTGCAGGAAGAACACTTAAAGGTAGAGATCTGAGTAGGGTAAGAAATGCTGTTTTGACCAGAACTGGATTTCTTGAATAA 561 39.39 MESEYGMYRKGSSGWSSMVGNEEFQETDIWSVLNERKGKFDSKFERSSSSRAISFPSAARMIPRSSTTTTTTNNPEVPQQQSAPVNIPDWSKIYGNKSKRSSQNSAWLDYGDDDDDGHDGRLNWDSDDDDDDDNGNMMPPHEWIAQKLARSQISSFSVCEGAGRTLKGRDLSRVRNAVLTRTGFLE 186
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00062 186 Pfam Senescence regulator 22 186 IPR007608 -
Armi1g00062 186 MobiDBLite consensus disorder prediction 40 140 - -
Armi1g00062 186 PANTHER EXPRESSED PROTEIN 19 185 - -
Armi1g00062 186 MobiDBLite consensus disorder prediction 1 20 - -
Armi1g00062 186 MobiDBLite consensus disorder prediction 47 87 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00062 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
371579 Armi Armi17g00947 Armi-Chr17:45051349 Armi1g00062 Armi-Chr1:1062272
373485 Armi Armi1g00062 Armi-Chr1:1062272 Armi6g00383 Armi-Chr6:7383956
413136 Armi Armi1g00062 Armi-Chr1:1062272 Armi15g01568 Armi-Chr15:75360040