Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00064	ATGGCCAAAAGCTCCTTCAAATTGGAACATCCTCTAGAGAGGCGCCAAGCTGAGGCTGCTCGTATAAGGGAAAAGTATCCCGACAGAATACCGGTTATTGTGGAGAAGGCCGAAAGAAGCGACATACCCGACATAGACAAGAAAAAATATCTGGTACCTGCTGATCTGAGTGTAGGACAGTTTGTGTATGTGGTAAGAAAAAGGATTAAGCTGAGTGCAGAAAAGGCTATCTTCATCTTTGTCAAGAATGTCTTGCCACCCACTGCTGCAATGATGTCTGCAATATATGAGGAAAACAAAGATGAGGATGGTTTCCTGTACATGACATACAGTGGGGAGAATACATTTGGAATTGGAGCTGAATGA	366	43.44	MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGIGAE	121

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00064	121	Pfam	Autophagy protein Atg8 ubiquitin like	14	117	IPR004241	-
	Armi1g00064	121	SUPERFAMILY	Ubiquitin-like	3	117	IPR029071	-
	Armi1g00064	121	Gene3D	-	1	118	-	-
	Armi1g00064	121	FunFam	Autophagy-related protein	1	117	-	-
	Armi1g00064	121	PANTHER	MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED	3	117	IPR004241	GO:0006995(PANTHER)
	Armi1g00064	121	CDD	Ubl-ATG8	12	114	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00064	K08341	GABA(A) receptor-associated protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	19349	Armi14g01564	Armi1g00064

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	373487	Armi	Armi1g00064	Armi-Chr1:1075251	Armi5g00042	Armi-Chr5:973387
	412415	Armi	Armi1g00064	Armi-Chr1:1075251	Armi14g01564	Armi-Chr14:76640705
	413137	Armi	Armi1g00064	Armi-Chr1:1075251	Armi15g01569	Armi-Chr15:75373555