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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00124 ATGAGTCGATTCGATCAAAACGAGATTCCAGTTGCGTATCCTCCTGCACCACAAGGCGCGTCGTATGTGATGGCACCACCGCCGGTGGGGTATCCGATGAAGGACGGCGCCGCCGCCAAATCTGAAAATCAGGCTCACGTGCAAACTCAGAGCAGAGGCGATGGCTTCTGGAAAGGATGTTGTGCTGCACTTTGTTGCTGTTGCGTGTTGGATGCCTGCTTCTAG 225 54.67 MSRFDQNEIPVAYPPAPQGASYVMAPPPVGYPMKDGAAAKSENQAHVQTQSRGDGFWKGCCAALCCCCVLDACF 74
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00124 74 Pfam Cysteine-rich TM module stress tolerance 26 74 IPR028144 -
Armi1g00124 74 PANTHER RCG49325, ISOFORM CRA-A 1 74 IPR044850 GO:0005886(PANTHER)|GO:0005886(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00124 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr9:25455586 Armi1g00124 Armi-Chr1:2534777 transposed
Armi Armi-Chr1:2534777 Armi8g02874 Armi-Chr8:99433924 wgd