AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00148 ATGAATCTCGCAATTTTAGCGCGATCCTCACCTCTCTTCACCACATCAAGAATCCTCCATCGCTCCATTGCAAGTAAACCTTTTTCATGTTGTTCAATTTCGAATTCACCCAATTCAATAAACCCTAAAACCCCACTATTTCTCCGACCACCCACTTTCTCCGCAACCCTATCCGACCTCCAAAAATGGCAAAATTGGGCGAAATCCATCGCCTCCACCGTCAAATCATCCTTCACAGATTCAGACAACGGTCCAAACTCCAATGATTTACACCGAGAACTCAATTGGCTCATCGAAGACGCGTTGGAAAACCCCCAATCGTTATTAACTCACAACGAATTCGAAATCGATTACGTTTTGCGTCTACGAGCTGATTTGGATGAGCTGTACTTGTTATGGAAGCAAAGGATTGAGAAGAGAAGGCCGTTTCAGTATGTTGTAGGTTGTGAGCATTGGAGGGATTTGGTGGTTAGTGTTGAAGAAGGGGTTTTGATTCCAAGGCCTGAGACTGAATTGATGGTTGATTTGGTGGATGATGTGATTAAGGAGAATGAAGATTTGAAGGAAGGGTTGTGGGTTGATTTGGGGACTGGTAGTGGTGCAATTGCGATTGGGATTGTGAGGATTTTGGGGGATTTTGGGAGAGTTATTGCGACTGATTTGAGTCATGTTGCTGTTCAAGTTGCTTCATTCAATGTGAATAGGTATAATTTGCAGGATAAAATTTCTGTAAAGCAAGGGTCATGGTTCGAACCATTGAGCGGGTTTGAAGGACGGGTTGCAGGCCTTGTAAGCAATCCACCATACATACCCAGTGGCCACGTCAGTGGGCTCCAAGCCGAAGTTGGTAGACACGAACCAATACTCGCATTAGATGGTGGCGAAGATGGCATGGCTGACCTTCTACATCTTTGCAATGGTGCTGCTTTGATGCTAAAATCTGGTGGATTTTTCGCTTTCGAGACAAATGGTGAAGATCAATGCAGGTTTCTTGTGGACCATATGGAAACCATTCACAATGGCAGTTTCTACAATCTAAAGATCATACCAGATTTTGCTGGCATCCAGCGTTTTGTAACTGGGATCAGATCATAA 1095 44.02 MNLAILARSSPLFTTSRILHRSIASKPFSCCSISNSPNSINPKTPLFLRPPTFSATLSDLQKWQNWAKSIASTVKSSFTDSDNGPNSNDLHRELNWLIEDALENPQSLLTHNEFEIDYVLRLRADLDELYLLWKQRIEKRRPFQYVVGCEHWRDLVVSVEEGVLIPRPETELMVDLVDDVIKENEDLKEGLWVDLGTGSGAIAIGIVRILGDFGRVIATDLSHVAVQVASFNVNRYNLQDKISVKQGSWFEPLSGFEGRVAGLVSNPPYIPSGHVSGLQAEVGRHEPILALDGGEDGMADLLHLCNGAALMLKSGGFFAFETNGEDQCRFLVDHMETIHNGSFYNLKIIPDFAGIQRFVTGIRS 364
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00148 364 Gene3D Vaccinia Virus protein VP39 158 364 IPR029063 -
Armi1g00148 364 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 263 269 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
Armi1g00148 364 Pfam Ribosomal protein L11 methyltransferase (PrmA) 170 245 - -
Armi1g00148 364 PANTHER - 19 363 IPR052663 -
Armi1g00148 364 NCBIfam HemK family protein methyltransferase 126 363 IPR004556 GO:0006479(InterPro)|GO:0008276(InterPro)
Armi1g00148 364 CDD AdoMet-MTases 193 274 - -
Armi1g00148 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 335 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00148 K02493 release factor glutamine methyltransferase [EC:2.1.1.297]