Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00163	ATGTCTGGAGGCGATCACAATGATCACGTTGTACAGTTGAGGTCGAATTCATCGTCTTCAGGCGACGATTTGGAAGGTAAAGTATCATCTGTAAGAAGTAGTAAAGGAATTAAGGATCTGTGGAAAAAGTTGGATCGACGGTTTTCTGGTCGACGTCTTAGTATCAAGCGTCGGTTGCCTAGGGAAAACCGGTTAGATTGCGATTATGCGACGGCTAGTGGTAGCGGAGGAAGTGGTGGCGTTGCTGGTGGTGATGAGATCCTTGGAGATGGAGCTCCTCCGGAATGGGCGCTGCTGCTTATTGGATGTCTTCTTGGCTTGGCTACCGGTCTCTGTGTTGCTGCCTTTAATCGTGGGGTGCATGTAATACATGAATGGTCTTGGGCTGGTACCCCTAACGAAGGTGCTGCTTGGCTACGTTTACAGAGGCTGGGTGACACTTGGCATCGGATACTTCTGATACCAGTCACTGGAGGAGTCATTGTTGGGGTGTTGCATGGTTTACTTGAAATATTACACCAGATAAAACAGTCAAATCCTGGACATGACTTTAACCTGCTTTCTGGAGTCTTTCCGACCGTGAAGGCTATCCAAGCTGCTGTAACCTTAGGTACTGGCTGTTCTTTGGGTCCTGAAGGACCTAGTGTAGATATCGGGAAATCATGTGCCAATGGATTCTCATTAATGATGGAAAATAACAAGGAACGCAGGATAGCTCTTGTTGCAGCTGGTGCAGCTGCTGGCATATCTTCAGGTTTCAATGCAGCAGTAGCTGGTTGTTTCTTTGCCATTGAGACTGTGTTAAGGCCTCAATGTGCTGAAAACTCTCCCCCTTTCACCACTGCAATGATAATATTGGCATCAGTTATTTCGTCAACTGTGTCAAGTGTTATACTTGGAGAAAAGCAAGCTTTCACAGTGCCGACGTATGATTTGAAATCTGCTGCTGAACTACCTCTCTACTTGATCCTGGGAATGCTATGTGGTGTGGTTAGTGTGCTATTTACTCGCTTAGTAGCTTGGTTCAACAAAGCATTTGCATATATCGAGGAAACATTTGGACTTCCTGCTATTGTTTCTCCGGCATTAGGTGGTCTAGGAGCAGGGTTGATAGCGCTAAAATATCCTGGAATTCTTTACTGGGGCTTCACTAATATTGATGAAATTTTACATACTGGGAAGACAGCTTCGGCACCTGGAATCTGGCTATTAGCGCAGTTAGCTGCCGCAAAAGTTGTGGCCACGGCTCTTTGCAAAGGTTCAGGGCTTGTTGGTGGCTTGTATGCACCAAGTTTGATGATAGGTGCTGCAGTAGGTGCCGTATTTGGAGGTTCAGCAGGGAAATTAATTAACTCAGCCATATCGGGAAATGCTGCTATTGCCCAGCCACAGGCATATGCATTAGTTGGAATGGCTGCTACCTTGGCTTCTGTTTGTTCTGTACCCTTGACTTCAGTTCTGCTTCTATTTGAGCTGACAAAGGATTATAGAATCTTGCTTCCTCTCATGGGAGCTGTTGGATTGGCAATATGGGTGCCATCTGTGGCAAACCAATCTAAGGAGGCTGAAGGATCTGATGCAAGGAGTTCATCAAGAGGGTATTCCATTCTTTCACCAATTGATGATTGGAGACAAAATGGCGAAGATGATTTGGAACTTTGCATAATGGGACCCGGTGATAGCCATGAAGCAATTGATGAGGATATTATTCTCGAGGATTTGAAGGTTTCTCAGGCTATGTCGAACAACTATCCGAAAGTCCTATTATCATCAACTGTTAACGAGGCTGTGAAATGCATGAACGATGGCCAACAAAGTTGTGTGCTTGTCGTTGATCCTGAAGATCACTTAGAAGGGATTCTAACCTATGGTGACATTAAAAGGGGCATTTTTAAGACCCTTAATAAATCCTCCGACAGTGGTTCATCAACTTCCAATTTAAGTGAGTATTTGGTTTCTTCCATCTGCACTCGAGGGATAAACTATCGTGGAAGAAAGCGTGGTATTCTAACTTGTTATCCCGATACTGATTTGGCAATTGCTAAAAAACTAATGGAGGCCAAAGAAATCAAGCAATTACCCGTGGTACAGCATGTTGTTGATTTTCAAGAAGAAAGAAAGCGCAGGGTTGTTGCCATTCTCTATTACCATTCAGTCTGGAGCTGCCTCAGAGAGGAGCTAAATCGCAGGGGCACACGGAGGACCGAAGACCATATCGAAGAGAAGAGTTGCAATGGGTAG	2241	44.98	MSGGDHNDHVVQLRSNSSSSGDDLEGKVSSVRSSKGIKDLWKKLDRRFSGRRLSIKRRLPRENRLDCDYATASGSGGSGGVAGGDEILGDGAPPEWALLLIGCLLGLATGLCVAAFNRGVHVIHEWSWAGTPNEGAAWLRLQRLGDTWHRILLIPVTGGVIVGVLHGLLEILHQIKQSNPGHDFNLLSGVFPTVKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNKERRIALVAAGAAAGISSGFNAAVAGCFFAIETVLRPQCAENSPPFTTAMIILASVISSTVSSVILGEKQAFTVPTYDLKSAAELPLYLILGMLCGVVSVLFTRLVAWFNKAFAYIEETFGLPAIVSPALGGLGAGLIALKYPGILYWGFTNIDEILHTGKTASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAGKLINSAISGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQSKEAEGSDARSSSRGYSILSPIDDWRQNGEDDLELCIMGPGDSHEAIDEDIILEDLKVSQAMSNNYPKVLLSSTVNEAVKCMNDGQQSCVLVVDPEDHLEGILTYGDIKRGIFKTLNKSSDSGSSTSNLSEYLVSSICTRGINYRGRKRGILTCYPDTDLAIAKKLMEAKEIKQLPVVQHVVDFQEERKRRVVAILYYHSVWSCLREELNRRGTRRTEDHIEEKSCNG	746

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00163	746	Gene3D	-	560	723	IPR046342	-
	Armi1g00163	746	FunFam	Chloride channel protein	86	528	-	-
	Armi1g00163	746	MobiDBLite	consensus disorder prediction	9	27	-	-
	Armi1g00163	746	PANTHER	CHLORIDE CHANNEL PROTEIN CLC-E	31	730	IPR050368	GO:0005794(PANTHER)\|GO:0009507(PANTHER)
	Armi1g00163	746	SMART	cbs-1	583	631	IPR000644	-
	Armi1g00163	746	SMART	cbs-1	668	724	IPR000644	-
	Armi1g00163	746	MobiDBLite	consensus disorder prediction	1	33	-	-
	Armi1g00163	746	SUPERFAMILY	Clc chloride channel	95	516	IPR014743	-
	Armi1g00163	746	Pfam	Voltage gated chloride channel	177	512	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	CDD	Voltage-gated-ClC	108	509	-	-
	Armi1g00163	746	Gene3D	Clc chloride channel	90	527	-	-
	Armi1g00163	746	Pfam	CBS domain	576	630	IPR000644	-
	Armi1g00163	746	PRINTS	Chloride channel signature	195	214	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	PRINTS	Chloride channel signature	464	480	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	PRINTS	Chloride channel signature	482	501	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	PRINTS	Chloride channel signature	246	265	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	PRINTS	Chloride channel signature	423	443	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Armi1g00163	746	ProSiteProfiles	CBS domain profile.	580	637	IPR000644	-
	Armi1g00163	746	SUPERFAMILY	CBS-domain pair	574	727	IPR046342	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00163	K03281	chloride channel protein, CIC family

Event-related genes

Select	Gene_1	Gene_2	Event_name
	19391	Armi14g01659	Armi1g00163

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr13:32844708	Armi1g00163	Armi-Chr1:3087226	dispersed
	Armi	Armi-Chr1:3087226	Armi8g02903	Armi-Chr8:99907678	dispersed
	Armi	Armi-Chr1:3087226	Armi14g01659	Armi-Chr14:78034250	wgd