AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00165 ATGATATCCATTGATGATTATCATCATCCACCATCATCATCATCCCATCATCATCATCAAGAACAACAACAACAACAAATCTCTCATGATCATCATCTCAAGATCAACAGTGATGAGTTAGATCTGAAGTCACTAGATGCTGATCTTGATGACATCAACAACAGCAACAACAACCCACTTCCTAATTTCTCTATAAGGGATCATGTTTTCGGTTTAAGAAGCAAGGATGTTGAGCGTAATTGGCCGTTTTCTTCGAAAAGTTTGCAACTTTGTTTGAGAAATGGAGTGAAAAATGTGTTGCCACCTTTCCAGCCTCTTGATTTAGTGAGGGATAATAGCTCATCTATCACCCGATGCGATCTTGAAACCCGTTTGGCGCCAAATGAAGAACTCGTGAGCGGTTTTGATGGGGAGCCCATGGAAGATCGATTCGAACCCGTCACTTGTGATGCTGCCAAATCAAACCGAGAGCTACCCGTGAGGCCTGTAAGCGTGAATTCGATTGGGTCGAAAGAAAATAAGGAATCCAACACGAGATCGAAGGAAAAACCTCCGTCTCAGAAAAAGAGTAGATTGGTTATGAAATTGAATTCCGGCGTCGAACCGGTTGATCAATTAGATATCGCTCCAAACAGTTTCATCGTTTCCGAAACCATGGCGTCGAAAGTTTGCCCGGTTTGCAAGATTTTCTCGTCGTCGTCAAACACGACGCTAAACGCTCATATCGACCAGTGTCTAACGGGGGAGGCGAGTATGAAATGGACCGACAATCCAAAGGTTATAGTCAAACATAGGATCAAACCTCGGAAAACAAGATTAATGTCGGATATATACGAAACAGCTCCACATTGTACTGTCGAAGAGCTCGATAGAAGAAACGGTACGAGCTGGGCTACGAATTCGAGTTTTCCCGCTCAAGAATTCGAGTTTCAAGAAGAGAAAGAAGAGCCGAGATTAACGACTACGATCAATCCCGAAGTTGCTGACAACGAAGGCGATGTTTATATCGACACCAATGGCACAAAAGTTCGGATTTTGTCGGTGCCAAAAGCCGGTTCATCGGATAATAATGGAGCTCGGAAGCTACTGAAAGGCGTAAAAGGGTGTAAAATCGTTATCGGTAAGAAGAAACACAATCTTTTTAAGGCGAAACATCACCAGAAGTATCTCAAACTTGGATCGAAAGCTGGAAAATTACGCTCACCAAAGCCTCCTTCTAATGCTCATCGTGATTCTGAGATTGTTGATGAACAGATAACAAGTGGGCAGGAACAAGATGTTGCAATGGTGGAAAATTGTAGGAAAGATGAAGGAGACAGAGAGCCGATGAAAGCTCGGGTGCATATCGAAGAGTCGGGTTTGGCCATCGTAAGGCCGCCATGGGCGTGCTCAAAACGAACCCGTCTCGGGAAGAAGTTTAGCGGCAAGCGGCGGCAGCTCGTACGACAGAATTACCCAAGAAAAGATTTTCTTGTTGAAAGTGATAAATCTTCTTCAGGATGTGAAATTAGGAAGAAAACAAGAACTTCATCGCCGTTAACGAACCCAAGTTCGAAGCTTTTGAGGAAAGACGACACCTTTATGCATAACGATTCCGAGGGTTCTCAAGATTCGTATCCGTCCCGACACTCCGATGGCCCGGATATCCGACCGATGAACAGCAAGTTTTCGTCTTTGAGGAAGAATCTATCTTTTTCAGCAGCGAAGACTAGTTTGAAACGGAAATTTTCCGCTTTCGAGAAATCTCGAGTCATCCGTTGCATACCGAACGAAAAATCCGTTGATGGGCCGTCTCGGAATTCTCTGATCGAGCAATCTCGAATGGAAGAAGACACGAAGAGATCTATTACTTCCAAGAGTTTGAACGGTGAATCTTCAGTGGGAATCGAAACTGCGATTGACGATGCGTTACCGGACGTAGAATCCGTTAGAAACGAGAATAATCTACCCGATGACGATCAAGTTTGTGCCGTTCCAACCACCAGAATGATTGATGATGACAGACATTTGATGGATTTGAGCAATTCCTTCGATCCCGAGTTCTCGAAACTGGTCAGTCAACCTGATAAGCTATATGATCGGGAACAGATATGTTCGACTAATCGCGCTTATGATGGGAAAAACATATTCGGAAACGATATCGAAGATGGCACAGAGGATGTCGAAAAACATCAAGATTATTTTCAGGAGGTTGACCCAATTGACCCGATTCCGATTCCGGGACCACCGGGATCTTTCTTGCCTAGCCCCGGTGGAGATATGGTTTCCGAAGAGATCCCACCGATTAGGGTTCCGCCAAGCGAAAACCTGCGTAATCACGATACAATCGATCGAGATTCGATGTCGAATTCTCCGGTTTCAACTGTTTCTAATCCCAGTATGGCAAGATCAGATTCAAGATCATCAGAAAAGTTATCTTACAGATCTAGTTCTGTTCAAGATGATCAAAGGCCCGGTTTTTCGGGTGTTATGATCGAACCCACGTTCAAGAAATCTTTCCCGAACGGTGGTAACGATTGGAGACCCGTCGATCAAACCGAAAAGGGTCCATCTCCGACCAATTTCAAGAACGATCAGCCATGCTGTTGCTCTCGAAAAGAGTCCGCTTCATCGTACTCGGTTGCTTCAAACTATCAAGATTCGTCGTTTTTGAGGAAACAACAACCGATCGAGTCGATGTTCTTGCTAAACAACTACCCAACTTCGCAACCACCCGACACCATGGTTTTTCCAACCACCACCAAGAAATCGCCTACTCGCGTTAAGTTGCCGATTTACAGCGATTGCGACTCTGCCGCTAGTCCTTCGAAACCCGTTCTTCGACTAATGGGAAAGAACTTAACCGTGGTCAAGACCGATGAAGATGTAACGTCTTCATCATCATCGCAGCAATTTAGACCACCCATGAGTCAAATGGTTCGTAACGATCCGAAAGAGGACACCCATGGCTACCCTCACCGGCCCGTGATCTTTAGCCGGTACCAAAACGGGTCCGAGTCTAACCATTTCAACGGCGAACCACCGATCAATATGAGATCAAGTTTCATGGATCGTTACGGTCACGGTGGCTCGAACTTTGGTCCGATGGTACCTCCGACGAGGTCCCACTACGGCTATAACGGAGCCAATCCGCAAATGCCACGTGGACAAAATACTTACAATTCTGTATCGACCTCGAATCCCGTTAAAGAAATCATCATCATTGATGATTCTTCCCCTGAAAATGAAGCTGATGATCAATTCTTGAGAAGAAATCATTCTGTGCAGATGAATCAGTTTTACTCGATGTACCAATCACCGAGTTCCGATCATCATCATCATCCGTATGGTGGCGGCGGTCCGGCGGTGTTTCGTGGCGGCGGTTATCAAACTTCTTTCGGTATGCAAATGGGATCATCGTCATCATTATCATCATCACCATCGAATTCGATCTCTCATTTACGAGCTTCGACCGCATACTATCCTCCTCGCTATCCATGA 3480 45.17 MISIDDYHHPPSSSSHHHHQEQQQQQISHDHHLKINSDELDLKSLDADLDDINNSNNNPLPNFSIRDHVFGLRSKDVERNWPFSSKSLQLCLRNGVKNVLPPFQPLDLVRDNSSSITRCDLETRLAPNEELVSGFDGEPMEDRFEPVTCDAAKSNRELPVRPVSVNSIGSKENKESNTRSKEKPPSQKKSRLVMKLNSGVEPVDQLDIAPNSFIVSETMASKVCPVCKIFSSSSNTTLNAHIDQCLTGEASMKWTDNPKVIVKHRIKPRKTRLMSDIYETAPHCTVEELDRRNGTSWATNSSFPAQEFEFQEEKEEPRLTTTINPEVADNEGDVYIDTNGTKVRILSVPKAGSSDNNGARKLLKGVKGCKIVIGKKKHNLFKAKHHQKYLKLGSKAGKLRSPKPPSNAHRDSEIVDEQITSGQEQDVAMVENCRKDEGDREPMKARVHIEESGLAIVRPPWACSKRTRLGKKFSGKRRQLVRQNYPRKDFLVESDKSSSGCEIRKKTRTSSPLTNPSSKLLRKDDTFMHNDSEGSQDSYPSRHSDGPDIRPMNSKFSSLRKNLSFSAAKTSLKRKFSAFEKSRVIRCIPNEKSVDGPSRNSLIEQSRMEEDTKRSITSKSLNGESSVGIETAIDDALPDVESVRNENNLPDDDQVCAVPTTRMIDDDRHLMDLSNSFDPEFSKLVSQPDKLYDREQICSTNRAYDGKNIFGNDIEDGTEDVEKHQDYFQEVDPIDPIPIPGPPGSFLPSPGGDMVSEEIPPIRVPPSENLRNHDTIDRDSMSNSPVSTVSNPSMARSDSRSSEKLSYRSSSVQDDQRPGFSGVMIEPTFKKSFPNGGNDWRPVDQTEKGPSPTNFKNDQPCCCSRKESASSYSVASNYQDSSFLRKQQPIESMFLLNNYPTSQPPDTMVFPTTTKKSPTRVKLPIYSDCDSAASPSKPVLRLMGKNLTVVKTDEDVTSSSSSQQFRPPMSQMVRNDPKEDTHGYPHRPVIFSRYQNGSESNHFNGEPPINMRSSFMDRYGHGGSNFGPMVPPTRSHYGYNGANPQMPRGQNTYNSVSTSNPVKEIIIIDDSSPENEADDQFLRRNHSVQMNQFYSMYQSPSSDHHHHPYGGGGPAVFRGGGYQTSFGMQMGSSSSLSSSPSNSISHLRASTAYYPPRYP 1159
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00165 1159 MobiDBLite consensus disorder prediction 1128 1149 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 1128 1159 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 1 29 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 10 29 - -
Armi1g00165 1159 Gene3D Classic Zinc Finger 223 249 - -
Armi1g00165 1159 PANTHER HAPLESS PROTEIN 1 544 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 491 554 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 392 412 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 738 859 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 504 521 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 779 817 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 160 191 - -
Armi1g00165 1159 MobiDBLite consensus disorder prediction 174 189 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00165 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20160 Armi1g00165 Armi8g02857
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:3167413 Armi8g02857 Armi-Chr8:99283021 wgd