AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00181 ATGAGCTGGTGGCGATCGGGATTCGTCGGCGCTGCAAGGAGAAAATTGGAGGACAACAATCCATCACGCAAGTACCAGAAATTCGCGCTAATAATCGGAGTCACCGGCGTCGTCGGCAACAGCCTCGCCGAGATCCTACCGCTCCACGACACCCCCGGCGGTCCGTGGAAGGTTTACGGAGTCGCTCGCCGCCCACGACCACCATGGAACACCGATTACCCCATAGACTACATCCAATGCGACATCACCGATCCCGAACAAACCCAATCCAAACTCTCTCCCCTAACGGACCTCACCCATCTTTTTTACGTCACGTGGGCCAACTGCGCCACCGAACCCGAAAACTGCGAAACCAACGGCAAAATGTTCACCAACGTCCTCGACGCCGTAATCCCAAACGCCCCGAATTTACAACACATCTGCTTACAAACAGGCCGTAAACATTACATCGGGTCATTCGAAGCTATTTTAGCGAAAAAAATGGTCCACGATCCGCCTTTTCACGAAGATCTCCCCCGACTCGATTCCCCGAACTTCTACTACACACTCGAAGACATCCTGTTCAAACAAGTCGGAAAAAAGGAAGGACTAACATGGTCCGTCCATCGACCCGGGGTCATTTTCGGGTTTTCACCGTACAGTATGATGAACATCTTGACAAGCCTATGCGTTTACGCCGCGATCTGCAAACACGAAGGCGCGCCGTTGAAGTTTCCGGGAACGAAAGAGGCGTGGAACAGCTACTCCGACGCCTCGGATGCCGACCTGATCGCCGAGCACCAGATATGGGCGGCGGTCGATCCGATCGCGAGGAACGAAGCGTTTAACATCAATAACGGGGACGTGTTCAAATGGAAGCATTTGTGGAACGTGTTGGCGGAGCAATTCGAGGTCGAAAATGGTGGGTTTTGGGAAGATGAAGAAGGGAAAAGAAGCTTGGTGGAGATGATGAAAGATAAAGGGGGTGTTTGGGATGAAATTGTGAAGGAGAAGGGTATTTTGGGAACAAAGTTAGAGGAGGTTGGGGGGTGGTGGTTTGTGGATATTGTTTTAAGTAATGAAGGGATGTTGGATGTTATGAATAAGAGCAAAGAACATGGGTTTTTAGGGTTTAGAAATTCAAAATCATGTTTTGTTTCTTGGATTGATAAGATAAAATGTTGCAAGATTGTACCCTAG 1179 49.79 MSWWRSGFVGAARRKLEDNNPSRKYQKFALIIGVTGVVGNSLAEILPLHDTPGGPWKVYGVARRPRPPWNTDYPIDYIQCDITDPEQTQSKLSPLTDLTHLFYVTWANCATEPENCETNGKMFTNVLDAVIPNAPNLQHICLQTGRKHYIGSFEAILAKKMVHDPPFHEDLPRLDSPNFYYTLEDILFKQVGKKEGLTWSVHRPGVIFGFSPYSMMNILTSLCVYAAICKHEGAPLKFPGTKEAWNSYSDASDADLIAEHQIWAAVDPIARNEAFNINNGDVFKWKHLWNVLAEQFEVENGGFWEDEEGKRSLVEMMKDKGGVWDEIVKEKGILGTKLEEVGGWWFVDIVLSNEGMLDVMNKSKEHGFLGFRNSKSCFVSWIDKIKCCKIVP 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00181 392 Pfam PRISE-like Rossmann-fold domain 88 392 - -
Armi1g00181 392 CDD 5beta-POR-like-SDR-a 29 332 - -
Armi1g00181 392 Gene3D - 27 392 - -
Armi1g00181 392 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 23 392 - -
Armi1g00181 392 FunFam Iridoid synthase 25 392 - -
Armi1g00181 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 296 IPR036291 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00181 K22419 Delta4-3-oxosteroid 5beta-reductase [EC:1.3.1.3]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:3405365 Armi7g00667 Armi-Chr7:14936438 dispersed